Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS07510 and LRK54_RS07515 are separated by 259 nucleotidesLRK54_RS07515 and LRK54_RS07520 are separated by 266 nucleotidesLRK54_RS07520 and LRK54_RS07525 are separated by 3 nucleotidesLRK54_RS07525 and LRK54_RS07530 overlap by 4 nucleotides LRK54_RS07510: LRK54_RS07510 - DNA photolyase family protein, at 1,618,109 to 1,619,521 _RS07510 LRK54_RS07515: LRK54_RS07515 - tryptophan-rich sensory protein, at 1,619,781 to 1,620,269 _RS07515 LRK54_RS07520: LRK54_RS07520 - fatty acid desaturase, at 1,620,536 to 1,621,444 _RS07520 LRK54_RS07525: LRK54_RS07525 - FAD-dependent oxidoreductase, at 1,621,448 to 1,622,746 _RS07525 LRK54_RS07530: LRK54_RS07530 - DUF1365 domain-containing protein, at 1,622,743 to 1,623,543 _RS07530
Group Condition LRK54_RS07510 LRK54_RS07515 LRK54_RS07520 LRK54_RS07525 LRK54_RS07530
stress R2A with chromate 0.0048828125 mM -0.2 -0.5 -0.5 -0.1 -0.1
pH R2A pH5 -0.1 -0.9 -0.2 -0.2 -0.0
stress R2A with Chloride 250 mM -0.0 -0.6 -0.3 -0.0 -0.1
carbon source D-Glucose (C) and 20 AA mix; 20C +0.0 -0.4 -0.2 -0.4 -0.0
stress R2A with bismuth(III) chloride 0.03125 mM -0.3 -0.7 -0.1 +0.3 -0.1
stress R2A with sodium bromide 250 mM -0.2 -0.7 -0.0 +0.1 -0.1
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.1 -1.1 +0.2 -0.0 -0.1
stress R2A with silver chloride 1 mM -0.2 -0.1 -0.2 -0.2 -0.2
stress R2A with Cobalt chloride 0.15625 mM -0.1 -0.7 -0.2 +0.1 +0.1
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 -0.7 -0.2 +0.5 -0.1 -0.3
stress R2A with Nickel (II) chloride 0.3125 mM -0.2 -0.4 +0.0 -0.3 +0.1
stress R2A with Cesium chloride 3.90625 mM +0.1 -0.8 -0.1 +0.1 +0.1
stress R2A with Selective_ion_mix_1 1 X +0.2 -0.6 -0.1 -0.1 -0.0
stress R2A with chromate 0.0048828125 mM -0.1 +0.2 -0.3 -0.2 +0.1
pH R2A_PIPES pH 4.25 +0.2 +0.4 +0.1 -0.0 -0.4
carbon source D-Trehalose 20 mM +0.0 +0.4 -0.1 -0.2 -0.1
stress R2A with Selective_ion_mix_1 1 X +0.3 +0.0 -0.1 -0.2 +0.2
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM +0.1 +0.5 -0.2 +0.0 -0.0
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM +0.0 -0.3 +0.2 +0.3 -0.0
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.1 +0.6 -0.3 +0.3 -0.0
biofilm assay; biofilm sample biofilm; Day1; NLDM; +0.0 +0.4 -0.2 +0.2 +0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.1 -0.1 +0.4 +0.2 +0.1
no stress control no stress control +0.1 +0.8 +0.0 -0.0 -0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.1 +0.6 +0.0 +0.3 -0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.2 +0.3 -0.3 +0.2 +0.3
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.2 -0.1 +0.3 +0.3 +0.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.0 +0.9 -0.1 +0.3 -0.1
phage 1C-T1 +0.2 +0.3 +0.1 +0.2 +0.1
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM +0.1 +0.3 +0.1 +0.4 -0.0
biofilm assay; planktonic sample planktonic; Day1; NLDM; +0.3 +0.2 +0.2 +0.2 +0.2
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