Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS07480 and LRK54_RS07485 are separated by 366 nucleotidesLRK54_RS07485 and LRK54_RS07490 are separated by 110 nucleotidesLRK54_RS07490 and LRK54_RS07495 are separated by 810 nucleotidesLRK54_RS07495 and LRK54_RS07500 are separated by 245 nucleotides LRK54_RS07480: LRK54_RS07480 - succinate dehydrogenase iron-sulfur subunit, at 1,611,406 to 1,612,161 _RS07480 LRK54_RS07485: LRK54_RS07485 - electron transfer flavoprotein-ubiquinone oxidoreductase, at 1,612,528 to 1,614,174 _RS07485 LRK54_RS07490: LRK54_RS07490 - NAD(P)/FAD-dependent oxidoreductase, at 1,614,285 to 1,615,604 _RS07490 LRK54_RS07495: LRK54_RS07495 - hypothetical protein, at 1,616,415 to 1,616,591 _RS07495 LRK54_RS07500: LRK54_RS07500 - sigma-70 family RNA polymerase sigma factor, at 1,616,837 to 1,617,415 _RS07500
Group Condition LRK54_RS07480 LRK54_RS07485 LRK54_RS07490 LRK54_RS07495 LRK54_RS07500
stress R2A with m-arsenite 0.0390625 mM -0.2 -0.1 -0.1 -0.6 -0.1
stress R2A with copper (II) chloride 0.3125 mM -0.3 -0.1 -0.1 -0.3 -0.2
carbon source a-Cyclodextrin 20 mM +0.1 +0.0 -0.2 -0.6 -0.3
stress R2A with Aluminum chloride 1.5625 mM -0.1 -0.1 -0.0 -0.7 +0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; +0.1 +0.1 +0.0 -0.6 -0.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; +0.0 -0.2 +0.2 -0.4 -0.4
stress R2A with Nickel (II) chloride 0.3125 mM -0.1 -0.2 +0.4 -0.5 -0.2
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM -0.4 +0.2 -0.4 +0.2 -0.2
stress R2A with Selective_ion_mix_1 1 X -0.4 +0.1 -0.3 +0.2 +0.1
stress R2A with chromate 0.0048828125 mM -0.3 -0.1 -0.1 +0.3 +0.1
stress R2A with Cesium chloride 3.90625 mM -0.2 -0.1 -0.2 +0.5 +0.0
phage 3B-T1 +0.0 +0.2 +0.2 -0.7 +0.3
phage 1A-T2 -0.0 +0.2 +0.3 -0.3 -0.2
r2a_control R2A control -0.1 -0.2 -0.2 +0.4 +0.1
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.0 -0.1 -0.2 +0.7 -0.4
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM -0.3 -0.0 -0.2 +0.5 +0.2
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 +0.1 +0.1 -0.1 +0.5 -0.4
stress R2A with mercury (II) chloride 0.009765625 mM -0.1 -0.1 -0.1 +0.8 -0.0
no stress control no stress control -0.0 -0.1 +0.0 +0.7 -0.2
carbon source D-Glucose-6-Phosphate 20 mM +0.1 -0.2 +0.4 +0.5 -0.2
phage 4E-T1 +0.3 +0.1 +0.5 -0.3 +0.0
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x +0.0 -0.0 +0.2 +0.6 -0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.0 +0.1 -0.2 +0.5 +0.2
no phage control No phage control +0.3 +0.3 +0.1 -0.2 +0.2
pH R2A_PIPES pH 4.25 +0.0 +0.0 +0.2 +0.6 -0.2
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x +0.3 +0.2 +0.2 +0.3 -0.0
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM +0.1 +0.2 +0.0 +0.4 +0.3
phage 2A-T2 +0.2 +0.1 +0.2 -0.0 +0.5
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 +0.3 +0.1 +0.3 +0.3 +0.1
phage 1C-T1 +0.2 +0.2 +0.3 +0.3 +0.2
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