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Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK54_RS07470 and LRK54_RS07475 are separated by 32 nucleotides
LRK54_RS07475 and LRK54_RS07480 are separated by 83 nucleotides
LRK54_RS07480 and LRK54_RS07485 are separated by 366 nucleotides
LRK54_RS07485 and LRK54_RS07490 are separated by 110 nucleotides
LRK54_RS07470: LRK54_RS07470 - succinate dehydrogenase, hydrophobic membrane anchor protein, at 1,609,086 to 1,609,493
_RS07470
LRK54_RS07475: LRK54_RS07475 - succinate dehydrogenase flavoprotein subunit, at 1,609,526 to 1,611,322
_RS07475
LRK54_RS07480: LRK54_RS07480 - succinate dehydrogenase iron-sulfur subunit, at 1,611,406 to 1,612,161
_RS07480
LRK54_RS07485: LRK54_RS07485 - electron transfer flavoprotein-ubiquinone oxidoreductase, at 1,612,528 to 1,614,174
_RS07485
LRK54_RS07490: LRK54_RS07490 - NAD(P)/FAD-dependent oxidoreductase, at 1,614,285 to 1,615,604
_RS07490
Group
Condition
LRK54
_RS07470
LRK54
_RS07475
LRK54
_RS07480
LRK54
_RS07485
LRK54
_RS07490
stress
R2A with Cesium chloride 3.90625 mM
-0.6
-0.0
-0.2
-0.1
-0.2
stress
R2A with Calcium chloride 250 mM
-0.5
-0.1
-0.2
-0.2
-0.1
stress
R2A with Cadmium chloride hemipentahydrate 0.0390625 mM
-0.5
-0.1
-0.2
-0.1
-0.2
stress
R2A with nitrite 25 mM
-0.5
+0.0
-0.2
-0.1
-0.2
stress
R2A with Magnesium sulfate 3.90625 mM
-0.4
-0.1
-0.2
-0.1
-0.3
stress
R2A with Cobalt chloride 0.15625 mM
-0.3
-0.2
-0.2
-0.1
-0.1
stress
R2A with bismuth(III) chloride 0.03125 mM
-0.3
-0.3
-0.3
-0.1
+0.1
r2a_control
R2A control
-0.4
-0.1
-0.2
-0.1
-0.1
stress
R2A with Zinc chloride 0.625 mM
-0.4
-0.1
-0.2
-0.1
-0.1
stress
R2A with Cesium chloride 3.90625 mM
-0.5
-0.0
-0.1
-0.2
-0.1
stress
R2A with m-arsenite 0.078125 mM
-0.3
-0.1
-0.2
-0.1
-0.1
stress
R2A with Nickel (II) chloride 0.3125 mM
-0.3
-0.3
-0.2
-0.1
-0.1
r2a_control
R2A control
-0.2
-0.1
-0.1
-0.2
-0.3
stress
R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
-0.1
+0.0
-0.4
+0.2
-0.4
stress
R2A with silver chloride 1 mM
-0.6
-0.1
+0.2
-0.2
-0.1
stress
R2A with Selective_ion_mix_1 1 X
+0.1
-0.1
-0.4
+0.1
-0.3
stress
R2A with Cobalt chloride 0.15625 mM
+0.3
-0.3
-0.1
-0.0
-0.3
stress
R2A with chromate 0.0048828125 mM
+0.4
-0.0
-0.3
-0.1
-0.1
stress
R2A with Nickel (II) chloride 0.3125 mM
-0.2
+0.1
-0.1
-0.2
+0.4
phage
1A-T2
+0.2
+0.1
-0.0
+0.2
+0.3
phage
SA-T2
+0.4
+0.1
-0.0
+0.1
+0.2
phage
1B-T1
+0.1
+0.1
+0.1
+0.3
+0.2
phage
2B-T1
+0.2
+0.2
+0.2
+0.1
+0.2
phage
2B-T2
+0.4
+0.1
+0.1
+0.1
+0.3
phage
SA-T1
+0.3
+0.1
+0.1
+0.2
+0.3
phage
2F-T1
+0.3
+0.3
+0.2
+0.2
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.3
+0.1
+0.3
+0.2
+0.2
phage
4E-T1
+0.3
+0.1
+0.3
+0.1
+0.5
phage
1C-T1
+0.4
+0.3
+0.2
+0.2
+0.3
biofilm assay; planktonic sample
Planktonic; Day2; SGW; pH7
+0.7
+0.1
+0.3
+0.1
+0.3
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