Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS07435 and LRK54_RS07440 are separated by 772 nucleotidesLRK54_RS07440 and LRK54_RS07445 are separated by 559 nucleotidesLRK54_RS07445 and LRK54_RS07450 are separated by 35 nucleotidesLRK54_RS07450 and LRK54_RS07455 are separated by 243 nucleotides LRK54_RS07435: LRK54_RS07435 - aspartate/glutamate racemase family protein, at 1,602,712 to 1,603,458 _RS07435 LRK54_RS07440: LRK54_RS07440 - hypothetical protein, at 1,604,231 to 1,604,668 _RS07440 LRK54_RS07445: LRK54_RS07445 - hypothetical protein, at 1,605,228 to 1,605,635 _RS07445 LRK54_RS07450: LRK54_RS07450 - aspartyl/asparaginyl beta-hydroxylase domain-containing protein, at 1,605,671 to 1,606,957 _RS07450 LRK54_RS07455: LRK54_RS07455 - hypothetical protein, at 1,607,201 to 1,607,989 _RS07455
Group Condition LRK54_RS07435 LRK54_RS07440 LRK54_RS07445 LRK54_RS07450 LRK54_RS07455
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -1.6 -0.0 -0.1 -0.4 -2.1
pH R2A pH5 -0.4 -0.1 -0.3 -0.2 -1.0
r2a_control R2A control -0.5 -0.3 -0.0 -0.1 -1.0
stress R2A with Zinc chloride 0.625 mM -0.5 -0.2 -0.1 +0.0 -0.8
phage phage 31.1 -1.0 -0.3 -0.3 +0.0 +0.0
stress R2A with FW104 filtrate 0.5 X -0.3 -0.0 -0.3 -0.1 -0.7
stress R2A with Nickel (II) chloride 0.625 mM -0.2 +0.0 -0.0 -0.2 -1.0
stress R2A with nitrate 125 mM -0.6 -0.1 +0.0 +0.1 -0.7
stress R2A with Cadmium chloride hemipentahydrate 0.0390625 mM -0.6 -0.2 -0.3 +0.0 -0.2
phage 1C-T2 -0.7 +0.1 +0.2 +0.1 -0.9
stress R2A with Nickel (II) chloride 0.3125 mM -1.3 -0.4 +0.2 -0.2 +0.7
stress R2A with bismuth(III) chloride 0.03125 mM -0.5 -0.4 -0.7 -0.2 +0.8
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.2 -0.1 -0.1 -0.2 -0.8
stress R2A with chromate 0.0048828125 mM -0.2 +0.3 -0.3 +0.1 -0.9
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.2 +0.3 +0.1 -0.1 -1.1
stress R2A with arsenate 31.25 mM -0.7 -0.0 -0.3 +0.1 +0.2
phage 2E-T1 -0.4 +0.2 +0.3 +0.0 -0.8
stress R2A with Chloride 250 mM +0.1 +0.2 +0.2 -0.1 -1.0
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.5 +0.1 -0.6 -0.2 +0.7
stress R2A with nitrite 50 mM -0.3 -0.2 -0.3 -0.2 +0.5
stress R2A with FW104 filtrate 0.5 X -0.5 -0.2 -0.3 +0.0 +0.4
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 +0.5 -0.2 -0.1 -0.3 -0.2
pH R2A pH6 -0.4 -0.2 -0.4 +0.0 +0.6
stress R2A with Cesium chloride 3.90625 mM -0.5 +0.2 +0.3 +0.1 -0.4
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 -0.7 +0.3 +0.2 +0.1 -0.2
phage 4E-T2 -0.6 -0.0 -0.2 +0.2 +0.4
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x +0.1 +0.2 -0.7 +0.2 +0.2
stress R2A with Cobalt chloride 0.15625 mM +0.5 -0.0 +0.2 +0.2 -0.4
carbon source acetate 20 mM +0.6 -0.2 +0.1 +0.2 +0.2
stress R2A with Selective_ion_mix_1 1 X -0.5 +0.2 +0.7 -0.1 +0.9
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