Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS07420 and LRK54_RS07425 are separated by 1 nucleotidesLRK54_RS07425 and LRK54_RS07430 are separated by 49 nucleotidesLRK54_RS07430 and LRK54_RS07435 are separated by 17 nucleotidesLRK54_RS07435 and LRK54_RS07440 are separated by 772 nucleotides LRK54_RS07420: LRK54_RS07420 - hydroxymethylglutaryl-CoA lyase, at 1,600,125 to 1,601,051 _RS07420 LRK54_RS07425: LRK54_RS07425 - CoA transferase, at 1,601,053 to 1,602,252 _RS07425 LRK54_RS07430: LRK54_RS07430 - nuclear transport factor 2 family protein, at 1,602,302 to 1,602,694 _RS07430 LRK54_RS07435: LRK54_RS07435 - aspartate/glutamate racemase family protein, at 1,602,712 to 1,603,458 _RS07435 LRK54_RS07440: LRK54_RS07440 - hypothetical protein, at 1,604,231 to 1,604,668 _RS07440
Group Condition LRK54_RS07420 LRK54_RS07425 LRK54_RS07430 LRK54_RS07435 LRK54_RS07440
stress R2A with Nickel (II) chloride 0.3125 mM -0.1 -0.7 -1.1 -1.3 -0.4
stress R2A with bismuth(III) chloride 0.03125 mM -0.4 -0.8 -1.3 -0.5 -0.4
phage 1C-T2 +0.1 -0.3 -2.3 -0.7 +0.1
stress R2A with Nickel (II) chloride 0.3125 mM -0.2 -1.0 -0.8 -0.5 -0.1
r2a_control R2A control -0.3 -0.5 -0.8 -0.7 -0.1
stress R2A with chromate 0.0048828125 mM -0.2 +0.3 -1.7 +0.0 -0.7
r2a_control R2A control -0.2 -0.5 -1.0 -0.3 -0.2
stress R2A with Other_metal_mix 1 X -0.4 -0.5 -0.7 -0.6 -0.1
r2a_control R2A control -0.3 -0.5 -0.7 -0.5 -0.2
stress R2A with nitrate 125 mM -0.1 -0.4 -0.9 -0.6 -0.1
r2a_control R2A control -0.3 -0.6 -0.8 -0.3 -0.1
stress R2A with m-arsenite 0.0390625 mM -0.1 -0.6 -0.6 -0.5 -0.2
r2a_control R2A control -0.3 -0.4 -0.7 -0.4 -0.1
stress R2A with nitrate 250 mM -0.1 -0.5 -0.6 -0.3 -0.4
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM -0.2 -0.5 -1.0 -0.3 -0.1
stress R2A with m-arsenite 0.078125 mM -0.1 -0.5 -0.8 -0.3 -0.3
r2a_control R2A control -0.2 -0.3 -0.6 -0.5 -0.3
stress R2A with Cadmium chloride hemipentahydrate 0.0390625 mM -0.1 -0.4 -0.6 -0.6 -0.2
phage 1E-T1 -0.3 -0.3 -0.5 -0.7 -0.1
stress R2A with Calcium chloride 125 mM +0.0 -0.5 -0.7 -0.5 +0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.1 -0.2 +0.3 -1.6 -0.0
phage phage 31.1 +0.0 -0.6 +0.3 -1.0 -0.3
stress R2A with chromate 0.0048828125 mM -0.1 -0.2 -1.4 -0.2 +0.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; +0.2 -0.1 -1.8 +0.0 +0.1
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 +0.1 -0.1 -1.0 -0.7 +0.3
carbon source a-Cyclodextrin 20 mM +0.6 -0.1 -1.6 -0.2 +0.0
stress R2A with Cesium chloride 3.90625 mM +0.2 -0.6 -0.6 -0.5 +0.2
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM -0.3 +0.4 -1.3 -0.2 +0.3
carbon source acetate 20 mM +0.2 -0.1 -0.9 +0.6 -0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; +0.3 -0.5 -0.6 +0.1 +0.4
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