Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS07155 and LRK54_RS07160 are separated by 21 nucleotidesLRK54_RS07160 and LRK54_RS07165 are separated by 283 nucleotidesLRK54_RS07165 and LRK54_RS07170 are separated by 109 nucleotidesLRK54_RS07170 and LRK54_RS07175 are separated by 106 nucleotides LRK54_RS07155: LRK54_RS07155 - ankyrin repeat domain-containing protein, at 1,533,280 to 1,536,720 _RS07155 LRK54_RS07160: LRK54_RS07160 - monovalent cation:proton antiporter-2 (CPA2) family protein, at 1,536,742 to 1,538,577 _RS07160 LRK54_RS07165: LRK54_RS07165 - DUF4325 domain-containing protein, at 1,538,861 to 1,539,919 _RS07165 LRK54_RS07170: LRK54_RS07170 - peptidyl-dipeptidase Dcp, at 1,540,029 to 1,542,203 _RS07170 LRK54_RS07175: LRK54_RS07175 - hypothetical protein, at 1,542,310 to 1,542,657 _RS07175
Group Condition LRK54_RS07155 LRK54_RS07160 LRK54_RS07165 LRK54_RS07170 LRK54_RS07175
stress R2A with bismuth(III) chloride 0.03125 mM -2.8 -0.5 +0.1 +0.0 -0.0
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.6 -1.8 +0.1 +0.1 +0.0
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -0.4 -1.0 -0.1 -0.2 -0.1
stress R2A with SpecU metal mix 1 X -2.0 -0.0 +0.1 +0.1 +0.3
stress R2A with nitrite 25 mM -1.5 -0.2 +0.0 +0.0 +0.0
stress R2A with Ferric chloride 1.5625 mM -1.6 +0.0 +0.1 +0.1 +0.2
biofilm assay; planktonic sample planktonic; Day1; NLDM; +0.3 -0.4 -0.3 -0.4 -0.4
stress R2A with Aluminum chloride 1.5625 mM -1.2 -0.2 +0.2 +0.2 +0.1
stress R2A with Aluminum chloride 3.125 mM -1.2 -0.6 +0.2 +0.5 +0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -1.1 -0.2 -0.2 +0.3 +0.3
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.6 -0.4 -0.3 -0.4 -0.4
stress R2A with SpecU metal mix 1 X -1.9 +0.3 +0.2 +0.3 +0.3
stress R2A with ammonium iron(II) sulfate 2.5 mM -1.1 +0.4 -0.1 +0.1 -0.1
stress R2A with Aluminum chloride 3.125 mM -1.0 -0.3 +0.2 +0.4 +0.0
phage 2A-T2 +0.3 -1.1 +0.1 +0.0 +0.2
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM -1.0 +0.2 +0.2 +0.4 -0.0
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM -0.8 -0.5 +0.3 +0.3 +0.7
stress R2A with Cesium chloride 3.90625 mM +0.6 -0.6 +0.1 +0.3 -0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.8 +0.6 +0.1 +0.1 +0.2
stress R2A with lithium chloride 15.625 mM +1.0 -0.6 +0.1 +0.3 +0.0
carbon source Gly-Glu 20 mM +1.4 -0.4 -0.0 +0.2 -0.1
carbon source Gly-Glu 20 mM +1.2 -0.2 -0.0 +0.2 +0.1
phage 1A-T2 +1.3 -0.3 +0.1 +0.1 +0.2
phage 1E-T2 +1.5 -0.1 +0.1 -0.0 +0.0
stress R2A with Manganese (II) chloride tetrahydrate 2.5 mM +1.3 -0.2 +0.2 +0.3 +0.0
phage 1E-T1 +1.9 +0.0 -0.2 +0.0 +0.0
phage 1D-T2 +1.7 -0.1 +0.1 -0.0 +0.2
phage 4B-T2 +1.8 -0.0 +0.1 +0.0 +0.2
carbon source a-Cyclodextrin 20 mM +2.2 +1.0 -0.1 +0.1 -0.3
carbon source a-Cyclodextrin 20 mM +2.3 +1.1 -0.0 +0.0 -0.2
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