Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS07005 and LRK54_RS07010 are separated by 294 nucleotidesLRK54_RS07010 and LRK54_RS07015 are separated by 94 nucleotidesLRK54_RS07015 and LRK54_RS07020 overlap by 4 nucleotidesLRK54_RS07020 and LRK54_RS07025 are separated by 94 nucleotides LRK54_RS07005: LRK54_RS07005 - spore coat protein U domain-containing protein, at 1,503,263 to 1,503,811 _RS07005 LRK54_RS07010: LRK54_RS07010 - FAD-binding oxidoreductase, at 1,504,106 to 1,504,867 _RS07010 LRK54_RS07015: LRK54_RS07015 - ABC transporter ATP-binding protein, at 1,504,962 to 1,505,927 _RS07015 LRK54_RS07020: LRK54_RS07020 - ABC transporter permease, at 1,505,924 to 1,506,706 _RS07020 LRK54_RS07025: LRK54_RS07025 - pseudouridine synthase, at 1,506,801 to 1,507,520 _RS07025
Group Condition LRK54_RS07005 LRK54_RS07010 LRK54_RS07015 LRK54_RS07020 LRK54_RS07025
biofilm assay; planktonic sample planktonic; Day1; NLDM; -2.0 -0.0 N.D. -2.2 -0.2
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -1.0 -0.3 N.D. -2.1 -0.1
stress R2A with arsenate 15.625 mM -0.3 +0.1 N.D. -2.9 -0.3
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -1.0 -0.2 N.D. -2.0 -0.1
stress R2A with arsenate 15.625 mM -0.2 -0.0 N.D. -2.9 +0.0
no stress control no stress control -0.9 +0.0 N.D. -2.4 +0.1
stress R2A with Nickel (II) chloride 0.3125 mM -0.3 -0.1 N.D. -2.5 -0.2
stress R2A with Nickel (II) chloride 0.3125 mM -0.0 -0.3 N.D. -2.7 -0.1
r2a_control R2A control -0.3 +0.0 N.D. -2.7 -0.1
no stress control no stress control -1.1 -0.2 N.D. -1.9 +0.3
r2a_control R2A control -0.3 +0.0 N.D. -2.6 -0.0
pH R2A_PIPES pH 4 -0.5 +0.1 N.D. -2.5 +0.1
r2a_control R2A control -0.2 -0.2 N.D. -2.7 +0.2
stress R2A with Nickel (II) chloride 0.625 mM -0.2 +0.0 N.D. -2.4 -0.2
stress R2A_PIPES with Cadmium chloride 16 uM -1.0 +0.1 N.D. -2.0 +0.1
r2a_control R2A control -0.4 -0.1 N.D. -2.3 +0.1
no stress control no stress control -0.7 -0.0 N.D. -2.0 +0.2
biofilm assay; planktonic sample planktonic; Day1; NLDM; -1.8 +0.0 N.D. -1.0 +0.2
biofilm assay; biofilm sample biofilm; Day1; NLDM; +0.7 -0.1 N.D. -3.1 +0.1
stress R2A with nitrate 125 mM +0.2 +0.1 N.D. -2.9 +0.0
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.1 +0.2 N.D. -2.4 -0.4
stress R2A with nitrate 125 mM +0.5 -0.1 N.D. -2.8 -0.0
stress R2A with lead(II) chloride 0.625 mM -1.3 +0.1 N.D. -1.3 +0.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +1.0 -0.1 N.D. -1.9 +0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; +2.4 -0.2 N.D. -1.9 +0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +2.2 +0.0 N.D. -1.5 +0.4
biofilm assay; biofilm sample biofilm; Day2; NLDM; +2.3 +0.1 N.D. -0.5 -0.3
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM -0.6 -0.1 N.D. +2.6 -0.2
carbon source Gly-Glu 20 mM -0.7 +0.2 N.D. +2.4 -0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; +2.4 +0.1 N.D. -0.4 -0.2
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