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Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK54_RS06910 and LRK54_RS06915 are separated by 91 nucleotides
LRK54_RS06915 and LRK54_RS06920 are separated by 158 nucleotides
LRK54_RS06920 and LRK54_RS06925 are separated by 59 nucleotides
LRK54_RS06925 and LRK54_RS06930 are separated by 38 nucleotides
LRK54_RS06910: LRK54_RS06910 - glutathionylspermidine synthase family protein, at 1,485,566 to 1,486,744
_RS06910
LRK54_RS06915: LRK54_RS06915 - hypothetical protein, at 1,486,836 to 1,487,270
_RS06915
LRK54_RS06920: LRK54_RS06920 - class I SAM-dependent rRNA methyltransferase, at 1,487,429 to 1,488,601
_RS06920
LRK54_RS06925: LRK54_RS06925 - alpha/beta hydrolase, at 1,488,661 to 1,489,491
_RS06925
LRK54_RS06930: LRK54_RS06930 - FAD-dependent oxidoreductase, at 1,489,530 to 1,490,723
_RS06930
Group
Condition
LRK54
_RS06910
LRK54
_RS06915
LRK54
_RS06920
LRK54
_RS06925
LRK54
_RS06930
stress
R2A with Cesium chloride 3.90625 mM
-2.0
-0.0
+0.1
+0.0
+0.1
stress
R2A with bismuth(III) chloride 0.03125 mM
-2.0
+0.0
+0.6
-0.5
+0.1
stress
R2A with Magnesium sulfate 3.90625 mM
-2.2
+0.4
+0.3
-0.2
-0.0
anaerobic
Anaerobic, acetate donor; nitrate and iron electron acceptors
-0.8
-0.7
+0.1
-0.1
+0.0
stress
R2A with Magnesium sulfate 3.90625 mM
-2.0
+0.1
+0.3
+0.1
-0.0
stress
R2A with Nickel (II) chloride 0.3125 mM
-1.3
-0.1
+0.2
-0.1
+0.0
stress
R2A with lead(II) chloride 0.625 mM
-1.2
-0.2
+0.3
-0.1
-0.0
stress
R2A with ammonium iron(II) sulfate 2.5 mM
-1.1
-0.3
+0.2
-0.1
-0.0
stress
R2A with lithium chloride 15.625 mM
-1.5
+0.1
+0.2
+0.0
-0.0
stress
R2A with sodium bromide 250 mM
-1.5
-0.0
+0.3
-0.1
+0.1
stress
R2A with Ferric chloride 1.5625 mM
-1.4
+0.2
+0.2
-0.1
+0.0
stress
R2A with Chloride 250 mM
-1.5
+0.1
+0.3
-0.0
+0.1
stress
R2A with Chloride 250 mM
-1.4
+0.1
+0.3
-0.1
+0.1
stress
R2A with Cesium chloride 3.90625 mM
-1.7
+0.3
+0.4
-0.0
-0.0
stress
R2A with lithium chloride 15.625 mM
-1.5
+0.2
+0.4
-0.2
+0.1
stress
R2A with lead(II) chloride 0.625 mM
-1.1
-0.3
+0.4
-0.1
+0.1
stress
R2A with silver chloride 1 mM
-1.6
+0.2
+0.1
+0.1
+0.1
stress
R2A with Chloride 250 mM
-1.3
+0.1
+0.3
-0.0
+0.0
stress
R2A with Nickel (II) chloride 0.3125 mM
-0.9
-0.5
+0.0
+0.3
+0.1
stress
R2A with Strontium chloride 3.90625 mM
-1.1
-0.2
+0.4
-0.1
+0.1
stress
R2A with Chloride 250 mM
-1.2
+0.2
+0.3
-0.1
-0.0
stress
R2A with silver chloride 1 mM
-1.4
+0.5
+0.5
-0.1
-0.1
stress
R2A with selenate 31.25 mM
-1.4
+0.2
+0.5
+0.0
+0.1
stress
R2A with sodium bromide 250 mM
-1.2
+0.2
+0.3
+0.1
+0.0
r2a_control
R2A control
-1.0
+0.3
+0.3
-0.1
-0.0
r2a_control
R2A control
-1.0
+0.3
+0.2
-0.1
+0.1
stress
R2A with m-arsenite 0.078125 mM
-1.1
-0.0
+0.4
+0.2
+0.1
r2a_control
R2A control
-1.0
+0.4
+0.3
-0.2
+0.0
stress
R2A with m-arsenite 0.078125 mM
-1.1
+0.1
+0.3
+0.1
+0.2
biofilm assay; biofilm sample
biofilm; Day2; NLDM; Aluminum chloride 1mM
+0.3
+0.6
+0.6
+0.5
-0.0
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LRK54_RS06920
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