Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS06730 and LRK54_RS06735 are separated by 68 nucleotidesLRK54_RS06735 and LRK54_RS06740 are separated by 36 nucleotidesLRK54_RS06740 and LRK54_RS06745 are separated by 134 nucleotidesLRK54_RS06745 and LRK54_RS06750 are separated by 80 nucleotides LRK54_RS06730: LRK54_RS06730 - YIP1 family protein, at 1,446,839 to 1,448,104 _RS06730 LRK54_RS06735: LRK54_RS06735 - YceI family protein, at 1,448,173 to 1,448,766 _RS06735 LRK54_RS06740: LRK54_RS06740 - malonic semialdehyde reductase, at 1,448,803 to 1,449,396 _RS06740 LRK54_RS06745: LRK54_RS06745 - mitochondrial fission ELM1 family protein, at 1,449,531 to 1,450,520 _RS06745 LRK54_RS06750: LRK54_RS06750 - bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase, at 1,450,601 to 1,453,444 _RS06750
Group Condition LRK54_RS06730 LRK54_RS06735 LRK54_RS06740 LRK54_RS06745 LRK54_RS06750
pH R2A_PIPES pH 4 -0.1 -0.3 -0.7 -2.3 -0.3
pH R2A_PIPES pH 4 +0.1 -0.1 -1.0 -1.9 -0.3
biofilm assay; planktonic sample planktonic; Day1; NLDM; +0.0 +0.0 -0.2 -2.5 +0.0
stress R2A_PIPES with Cobalt chloride 256 uM -0.0 -0.2 -0.5 -1.2 -0.3
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.1 -0.1 -0.6 -1.2 -0.2
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -0.2 -0.1 +0.0 -1.9 +0.1
stress R2A with bismuth(III) chloride 0.03125 mM -0.2 +0.4 -0.9 -2.0 +0.8
carbon source NAG 20 mM +0.1 +0.1 -0.5 -1.5 -0.0
carbon source D-Glucose-6-Phosphate 20 mM +0.1 +0.0 -1.2 -0.5 -0.3
biofilm assay; planktonic sample planktonic; Day1; NLDM; -0.0 +0.1 +0.0 -1.9 +0.0
biofilm assay; planktonic sample planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.0 -0.1 +0.2 -1.7 -0.0
carbon source D-Raffinose 20 mM +0.1 -0.1 -0.8 -1.0 +0.2
carbon source NAG 20 mM +0.1 +0.1 -0.4 -1.4 +0.2
biofilm assay; planktonic sample planktonic; Day1; NLDM; +0.0 +0.1 +0.1 -1.8 +0.1
carbon source a-Cyclodextrin 20 mM -0.1 +0.1 -0.3 -1.7 +0.5
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM +0.1 -0.1 -1.8 +0.5 -0.0
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 +0.1 -0.0 +0.3 -2.0 +0.3
stress R2A with silver chloride 1 mM +0.1 +0.0 -0.6 -1.3 +0.7
stress R2A with Cesium chloride 3.90625 mM -0.1 +0.1 -0.9 -0.9 +1.0
stress R2A with lithium chloride 15.625 mM -0.1 +0.0 -0.4 -1.0 +0.6
stress R2A with lithium chloride 15.625 mM -0.1 +0.2 -0.4 -1.0 +0.6
stress R2A with Nickel (II) chloride 0.3125 mM +0.1 -0.2 -0.8 +0.6 +0.6
stress R2A with Nickel (II) chloride 0.3125 mM +0.0 +0.5 -0.6 -0.5 +1.3
stress R2A with Magnesium sulfate 3.90625 mM -0.1 +0.1 -0.4 +0.7 +0.6
stress R2A with Magnesium sulfate 3.90625 mM +0.0 +0.1 -0.6 +0.8 +0.7
stress R2A with Calcium chloride 125 mM -0.0 +0.2 -0.4 +1.3 +0.6
stress R2A with Calcium chloride 250 mM -0.1 +0.1 -0.3 +1.7 +0.5
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM +0.0 +0.2 -0.0 +1.4 +0.6
stress R2A with Cobalt chloride 0.15625 mM +0.1 +0.4 +1.5 +1.5 -0.0
stress R2A with Cobalt chloride 0.15625 mM +0.2 +0.3 +1.5 +1.7 -0.2
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