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Cofit
Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK54_RS06530 and LRK54_RS06535 are separated by 47 nucleotides
LRK54_RS06535 and LRK54_RS06540 are separated by 238 nucleotides
LRK54_RS06540 and LRK54_RS06545 are separated by 250 nucleotides
LRK54_RS06545 and LRK54_RS06550 are separated by 203 nucleotides
LRK54_RS06530: LRK54_RS06530 - carbohydrate kinase family protein, at 1,403,889 to 1,404,824
_RS06530
LRK54_RS06535: LRK54_RS06535 - glycerol kinase GlpK, at 1,404,872 to 1,406,371
_RS06535
LRK54_RS06540: LRK54_RS06540 - 5S ribosomal RNA, at 1,406,610 to 1,406,723
_RS06540
LRK54_RS06545: LRK54_RS06545 - 23S ribosomal RNA, at 1,406,974 to 1,409,853
_RS06545
LRK54_RS06550: LRK54_RS06550 - tRNA-Ala, at 1,410,057 to 1,410,132
_RS06550
Group
Condition
LRK54
_RS06530
LRK54
_RS06535
LRK54
_RS06540
LRK54
_RS06545
LRK54
_RS06550
carbon source
a-Cyclodextrin 20 mM
-1.5
-0.0
N.D.
N.D.
N.D.
carbon source
D-Glucose-6-Phosphate 20 mM
-1.3
-0.2
N.D.
N.D.
N.D.
carbon source
a-Cyclodextrin 20 mM
-1.3
-0.1
N.D.
N.D.
N.D.
stress
R2A with Barium chloride 1.25 mM
+1.0
-0.5
N.D.
N.D.
N.D.
stress
R2A with Magnesium sulfate 3.90625 mM
+1.0
-0.5
N.D.
N.D.
N.D.
stress
R2A with beryllium sulfate tetrahydrate 1.953125 mM
+1.0
-0.4
N.D.
N.D.
N.D.
stress
R2A with Barium chloride 1.25 mM
+1.0
-0.4
N.D.
N.D.
N.D.
stress
R2A with lithium chloride 15.625 mM
+1.2
-0.5
N.D.
N.D.
N.D.
stress
R2A with Magnesium sulfate 3.90625 mM
+1.1
-0.4
N.D.
N.D.
N.D.
stress
R2A with Chloride 250 mM
+1.2
-0.4
N.D.
N.D.
N.D.
stress
R2A with Chloride 250 mM
+1.2
-0.4
N.D.
N.D.
N.D.
stress
R2A with lithium chloride 15.625 mM
+1.3
-0.5
N.D.
N.D.
N.D.
stress
R2A with Gallium(III)chloride 0.78125 mM
+1.4
-0.4
N.D.
N.D.
N.D.
stress
R2A with Calcium chloride 250 mM
+1.5
-0.3
N.D.
N.D.
N.D.
stress
R2A with Strontium chloride 3.90625 mM
+1.7
-0.5
N.D.
N.D.
N.D.
stress
R2A with Calcium chloride 125 mM
+1.5
-0.3
N.D.
N.D.
N.D.
stress
R2A with Calcium chloride 125 mM
+1.5
-0.2
N.D.
N.D.
N.D.
stress
R2A with Cesium chloride 3.90625 mM
+1.8
-0.5
N.D.
N.D.
N.D.
stress
R2A with arsenate 15.625 mM
+1.0
+0.4
N.D.
N.D.
N.D.
stress
R2A with Manganese (II) chloride tetrahydrate 6.25 mM
+1.9
-0.4
N.D.
N.D.
N.D.
stress
R2A with Cesium chloride 3.90625 mM
+1.9
-0.2
N.D.
N.D.
N.D.
stress
R2A with Nickel (II) chloride 0.3125 mM
+1.9
-0.1
N.D.
N.D.
N.D.
stress
R2A with Manganese (II) chloride tetrahydrate 6.25 mM
+2.2
-0.4
N.D.
N.D.
N.D.
stress
R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM
+1.2
+0.6
N.D.
N.D.
N.D.
stress
R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM
+1.4
+0.6
N.D.
N.D.
N.D.
stress
R2A with Calcium chloride 250 mM
+2.5
-0.4
N.D.
N.D.
N.D.
stress
R2A with Aluminum chloride 3.125 mM
+1.8
+0.3
N.D.
N.D.
N.D.
stress
R2A with Aluminum chloride 3.125 mM
+2.2
-0.1
N.D.
N.D.
N.D.
stress
R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
+3.1
-0.3
N.D.
N.D.
N.D.
stress
R2A with Nickel (II) chloride 0.3125 mM
+4.4
-0.1
N.D.
N.D.
N.D.
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