Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS05805 and LRK54_RS05810 are separated by 26 nucleotidesLRK54_RS05810 and LRK54_RS05815 are separated by 88 nucleotidesLRK54_RS05815 and LRK54_RS05820 are separated by 8 nucleotidesLRK54_RS05820 and LRK54_RS05825 are separated by 177 nucleotides LRK54_RS05805: LRK54_RS05805 - thiol peroxidase, at 1,252,905 to 1,253,405 _RS05805 LRK54_RS05810: LRK54_RS05810 - membrane protein, at 1,253,432 to 1,253,869 _RS05810 LRK54_RS05815: LRK54_RS05815 - SCO family protein, at 1,253,958 to 1,254,530 _RS05815 LRK54_RS05820: LRK54_RS05820 - formylglycine-generating enzyme family protein, at 1,254,539 to 1,255,303 _RS05820 LRK54_RS05825: LRK54_RS05825 - NnrS family protein, at 1,255,481 to 1,256,731 _RS05825
Group Condition LRK54_RS05805 LRK54_RS05810 LRK54_RS05815 LRK54_RS05820 LRK54_RS05825
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.5 -5.3 +0.5 +0.2 +0.0
stress R2A with chromate 0.0048828125 mM -1.6 -2.1 -0.3 -0.3 -0.1
stress R2A with Zinc chloride 0.625 mM -0.8 -2.3 -0.0 +0.1 -0.0
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +1.3 -4.1 -0.4 +0.3 +0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; +0.3 -3.0 -0.1 +0.1 +0.1
phage 4B-T2 -2.2 +0.6 -0.3 -0.1 +0.0
carbon source a-Cyclodextrin 20 mM -0.5 -1.0 -0.2 +0.1 -0.3
biofilm assay; biofilm sample biofilm; Day1; NLDM; -0.8 -1.0 +0.0 +0.1 +0.1
stress R2A with Cobalt chloride 0.15625 mM +0.3 -1.4 +0.1 -0.4 -0.2
anaerobic Anaerobic, acetate donor; nitrate electron acceptor -0.4 -0.3 +0.2 -0.1 -0.9
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.2 -1.6 -0.2 -0.1 +0.2
stress R2A with chromate 0.0048828125 mM +0.9 -1.9 -0.0 -0.2 -0.1
stress R2A with Nickel (II) chloride 0.3125 mM +0.3 -1.2 +0.1 -0.6 +0.0
stress R2A with bismuth(III) chloride 0.03125 mM -0.2 -1.4 +0.5 +0.1 -0.1
carbon source acetate 20 mM +0.7 -1.8 +0.0 +0.1 -0.1
stress R2A with Selective_ion_mix_1 1 X +0.7 -1.8 -0.0 -0.0 +0.1
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x -1.6 +0.6 +0.0 +0.1 +0.2
stress R2A with silver chloride 1 mM -1.2 +1.0 -0.1 -0.4 -0.0
stress R2A with Cobalt chloride 0.15625 mM -0.7 +1.1 -0.1 -0.2 -0.2
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 -0.4 +0.7 -0.5 +0.4 -0.1
phage SA-T1 +0.7 +0.7 -0.3 -0.1 -0.3
stress R2A_PIPES with Nickel (II) chloride 424 uM +0.6 +0.6 -0.6 +0.1 +0.1
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.7 +1.4 -0.0 +0.1 +0.3
carbon source D-Glucose-6-Phosphate 20 mM -0.5 +1.1 +0.4 +0.2 -0.2
stress R2A with Selective_ion_mix_1 1 X +0.5 +1.1 -0.0 -0.1 -0.3
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM +0.2 +1.2 +0.1 -0.3 -0.0
phage 2B-T2 +0.3 +1.4 -0.1 -0.1 -0.1
stress R2A with silver chloride 1 mM +0.5 +1.2 +0.1 -0.3 +0.1
phage phage 31.1 +0.8 +1.1 +0.2 -0.1 -0.0
stress R2A with Selective_ion_mix_1 1 X +1.3 +1.1 +0.1 -0.1 -0.1
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