Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS05670 and LRK54_RS05675 overlap by 4 nucleotidesLRK54_RS05675 and LRK54_RS05680 are separated by 130 nucleotidesLRK54_RS05680 and LRK54_RS05685 are separated by 132 nucleotidesLRK54_RS05685 and LRK54_RS05690 are separated by 128 nucleotides LRK54_RS05670: LRK54_RS05670 - glucose-1-phosphate thymidylyltransferase RfbA, at 1,224,779 to 1,225,669 _RS05670 LRK54_RS05675: LRK54_RS05675 - dTDP-4-dehydrorhamnose 3,5-epimerase, at 1,225,666 to 1,226,223 _RS05675 LRK54_RS05680: LRK54_RS05680 - dTDP-4-dehydrorhamnose reductase, at 1,226,354 to 1,227,289 _RS05680 LRK54_RS05685: LRK54_RS05685 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase, at 1,227,422 to 1,228,834 _RS05685 LRK54_RS05690: LRK54_RS05690 - magnesium-translocating P-type ATPase, at 1,228,963 to 1,231,509 _RS05690
Group Condition LRK54_RS05670 LRK54_RS05675 LRK54_RS05680 LRK54_RS05685 LRK54_RS05690
stress R2A with bismuth(III) chloride 0.03125 mM -1.9 N.D. N.D. -3.1 -0.4
pH R2A_PIPES pH 4 -2.4 N.D. N.D. -2.6 +0.1
pH R2A_PIPES pH 4 -2.2 N.D. N.D. -2.5 +0.0
stress R2A with Aluminum chloride 1.5625 mM -2.0 N.D. N.D. -1.7 +0.0
stress R2A with SpecU metal mix 1 X +0.1 N.D. N.D. -3.5 -0.1
stress R2A with Aluminum chloride 1.5625 mM -1.4 N.D. N.D. -2.2 +0.0
stress R2A with Uranyl acetate 2.5 mM -2.5 N.D. N.D. -0.9 +0.0
stress R2A with lithium chloride 15.625 mM -0.7 N.D. N.D. -2.5 -0.1
biofilm assay; planktonic sample planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -2.4 N.D. N.D. -1.1 +0.2
stress R2A with SpecU metal mix 1 X +0.4 N.D. N.D. -3.3 -0.1
stress R2A with Chloride 250 mM -2.5 N.D. N.D. +1.6 -0.1
stress R2A with Chloride 250 mM -2.0 N.D. N.D. +1.3 -0.0
stress R2A with Chloride 250 mM -2.1 N.D. N.D. +1.5 +0.0
r2a_control R2A control -1.9 N.D. N.D. +1.5 -0.1
stress R2A with Strontium chloride 3.90625 mM -2.2 N.D. N.D. +1.8 +0.1
r2a_control R2A control -1.9 N.D. N.D. +1.7 -0.0
stress R2A with Cesium chloride 3.90625 mM -2.0 N.D. N.D. +2.2 -0.0
r2a_control R2A control -1.6 N.D. N.D. +1.8 -0.0
stress R2A with lead(II) chloride 0.625 mM -1.9 N.D. N.D. +2.1 -0.0
r2a_control R2A control -1.6 N.D. N.D. +2.1 +0.0
stress R2A with Cesium chloride 3.90625 mM -1.4 N.D. N.D. +2.3 -0.0
r2a_control R2A control -1.4 N.D. N.D. +2.2 +0.1
stress R2A with lead(II) chloride 0.625 mM -1.1 N.D. N.D. +2.1 -0.1
carbon source a-Cyclodextrin 20 mM -1.2 N.D. N.D. +2.0 +0.2
stress R2A with Barium chloride 1.25 mM -1.2 N.D. N.D. +2.4 -0.0
stress R2A with Barium chloride 1.25 mM -1.3 N.D. N.D. +2.6 -0.1
stress R2A with Cobalt chloride 0.15625 mM +2.5 N.D. N.D. +0.9 -0.4
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM +0.6 N.D. N.D. +2.7 -0.2
stress R2A with Calcium chloride 125 mM +1.7 N.D. N.D. +1.6 +0.0
stress R2A with Calcium chloride 250 mM +1.9 N.D. N.D. +1.8 -0.1
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