Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS05490 and LRK54_RS05495 are separated by 694 nucleotidesLRK54_RS05495 and LRK54_RS05500 are separated by 53 nucleotidesLRK54_RS05500 and LRK54_RS05505 are separated by 137 nucleotidesLRK54_RS05505 and LRK54_RS05510 are separated by 91 nucleotides LRK54_RS05490: LRK54_RS05490 - energy transducer TonB, at 1,185,557 to 1,186,585 _RS05490 LRK54_RS05495: LRK54_RS05495 - met regulon transcriptional regulator MetJ, at 1,187,280 to 1,187,507 _RS05495 LRK54_RS05500: LRK54_RS05500 - hypothetical protein, at 1,187,561 to 1,187,980 _RS05500 LRK54_RS05505: LRK54_RS05505 - glycine cleavage system protein GcvH, at 1,188,118 to 1,188,513 _RS05505 LRK54_RS05510: LRK54_RS05510 - glycine cleavage system aminomethyltransferase GcvT, at 1,188,605 to 1,189,705 _RS05510
Group Condition LRK54_RS05490 LRK54_RS05495 LRK54_RS05500 LRK54_RS05505 LRK54_RS05510
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors -0.9 -1.6 -2.0 -2.8 -2.2
anaerobic Anaerobic, acetate donor; nitrate electron acceptor -0.6 -0.4 -2.8 -2.3 -2.1
stress R2A with Nickel (II) chloride 0.3125 mM -0.9 -3.6 -0.5 -0.6 -0.5
stress R2A with lithium chloride 15.625 mM -0.8 -2.6 -0.8 -1.4 -0.2
stress R2A with Cesium chloride 3.90625 mM -1.1 -2.8 +0.5 -1.1 -1.0
anaerobic Anaerobic, acetate donor; nitrate electron acceptor -0.2 -0.1 -2.8 -1.1 -1.2
stress R2A with Chloride 250 mM -0.4 -3.4 -0.3 -0.8 -0.3
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM -1.4 -1.9 -0.6 -0.5 -0.7
stress R2A with Calcium chloride 125 mM -1.6 -3.1 -0.2 -0.3 +0.1
stress R2A with ammonium iron(II) sulfate 2.5 mM -0.1 -3.1 +0.2 -1.2 -0.9
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors -0.2 +1.5 -2.5 -2.0 -1.8
stress R2A with Calcium chloride 125 mM -1.6 -2.0 -0.7 -0.4 +0.1
stress R2A with Cesium chloride 3.90625 mM -0.8 -2.5 +0.6 -1.2 -0.7
r2a_control R2A control -0.6 -2.9 +0.4 -0.8 -0.5
stress R2A with Calcium chloride 250 mM -1.2 -2.7 -0.7 -0.1 +0.5
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.3 -0.6 -3.6 -0.2 -0.0
stress R2A with Ferric chloride 1.5625 mM +0.2 -2.5 +0.6 -1.5 -1.0
stress R2A with Calcium chloride 250 mM -1.1 -3.1 +0.7 -0.2 -0.2
carbon source Gly-Glu 20 mM -0.3 +0.8 -1.4 -1.5 -1.4
stress R2A with Uranyl acetate 2.5 mM -0.5 -2.4 +0.6 -0.9 -0.5
stress R2A with bismuth(III) chloride 0.03125 mM -0.6 -2.8 +0.8 -0.7 -0.4
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM +0.6 -2.8 -0.8 -0.8 +0.2
stress R2A with Uranyl acetate 2.5 mM -0.5 -2.4 +1.0 -1.1 -0.6
carbon source D-Glucose-6-Phosphate 20 mM +0.7 +0.8 -2.7 -0.6 +0.0
carbon source NAG 20 mM +0.3 +0.9 -3.4 +0.4 +0.4
stress R2A with Nickel (II) chloride 0.3125 mM -0.4 -1.3 -1.6 +0.7 +1.4
stress R2A with m-arsenite 0.078125 mM -0.6 -2.6 +1.7 +0.3 +0.3
stress R2A with nitrite 25 mM -0.7 -2.1 +1.6 +0.4 +0.4
stress R2A with Manganese (II) chloride tetrahydrate 2.5 mM -0.6 -1.3 +0.6 +1.2 +1.4
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM -0.8 -0.5 +2.9 +0.9 +1.2
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