Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS05305 and LRK54_RS05310 are separated by 38 nucleotidesLRK54_RS05310 and LRK54_RS05315 are separated by 377 nucleotidesLRK54_RS05315 and LRK54_RS05320 are separated by 174 nucleotidesLRK54_RS05320 and LRK54_RS05325 are separated by 91 nucleotides LRK54_RS05305: LRK54_RS05305 - cystathionine gamma-synthase, at 1,139,610 to 1,140,797 _RS05305 LRK54_RS05310: LRK54_RS05310 - homoserine O-succinyltransferase, at 1,140,836 to 1,141,858 _RS05310 LRK54_RS05315: LRK54_RS05315 - cysteine synthase A, at 1,142,236 to 1,143,255 _RS05315 LRK54_RS05320: LRK54_RS05320 - 2OG-Fe dioxygenase family protein, at 1,143,430 to 1,144,152 _RS05320 LRK54_RS05325: LRK54_RS05325 - DUF1304 domain-containing protein, at 1,144,244 to 1,144,606 _RS05325
Group Condition LRK54_RS05305 LRK54_RS05310 LRK54_RS05315 LRK54_RS05320 LRK54_RS05325
phage 1B-T1 -2.3 -2.4 -0.3 -0.1 -0.1
carbon source D-Glucose-6-Phosphate 20 mM -2.0 -2.1 -0.2 -0.0 -0.2
carbon source pyruvate 20 mM -2.3 -2.1 +0.0 -0.0 +0.1
phage 2B-T1 -2.2 -2.8 +0.2 +0.2 +0.2
carbon source acetate 20 mM -1.9 -1.8 -0.2 +0.2 -0.3
carbon source D-Glucose (C) and 20 AA mix; 30C -2.1 -1.6 -0.3 +0.1 +0.2
carbon source pyruvate 20 mM -2.0 -2.0 +0.3 -0.0 -0.1
carbon source D-Glucosamine Hydrochloride 20 mM -2.2 -1.7 +0.3 -0.0 -0.1
carbon source D-Trehalose 20 mM -2.2 -2.1 +0.4 +0.2 +0.0
carbon source acetate 20 mM -2.2 -2.0 +0.5 +0.1 +0.1
carbon source NAG 20 mM -2.2 -1.6 +0.3 +0.2 -0.1
phage 2A-T1 -1.3 -1.8 -0.3 -0.2 +0.2
carbon source a-Cyclodextrin 20 mM -1.8 -2.4 +0.8 +0.1 -0.1
phage 2B-T2 -1.8 -2.2 +0.5 +0.1 -0.0
phage 2F-T1 -1.6 -1.4 -0.3 +0.0 -0.0
carbon source D-Glucosamine Hydrochloride 20 mM -1.7 -1.7 +0.3 -0.1 +0.1
carbon source D-Glucose 20 mM -1.6 -1.6 +0.3 -0.1 -0.0
carbon source D-Maltose 20 mM -1.8 -1.3 +0.3 +0.1 +0.1
carbon source D-Trehalose 20 mM -1.4 -1.2 +0.2 +0.1 -0.0
carbon source D-Glucose 20 mM -1.4 -1.3 +0.2 -0.1 +0.1
carbon source D-Glucose-6-Phosphate 20 mM -1.7 -1.3 +0.5 -0.0 +0.3
carbon source D-Glucose (C) and 20 AA mix; 20C -1.3 -1.2 +0.2 +0.2 +0.0
phage 3B-T1 -1.1 -1.3 -0.2 +0.2 +0.3
phage 2F-T2 -1.2 -1.1 +0.0 +0.2 +0.2
carbon source D-Maltose 20 mM -1.3 -1.2 +0.4 +0.2 +0.1
carbon source D-Raffinose 20 mM -0.9 -1.1 +0.4 +0.1 -0.2
carbon source NAG 20 mM -1.3 -1.0 +0.5 +0.0 +0.2
carbon source a-Cyclodextrin 20 mM -1.2 -1.2 +1.0 -0.3 +0.4
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.3 +0.6 -1.7 +0.0 +0.3
stress R2A with bismuth(III) chloride 0.03125 mM +0.4 +0.9 -0.2 +0.6 -0.9
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