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Protein
Homologs
Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK54_RS05245 and LRK54_RS05250 are separated by 119 nucleotides
LRK54_RS05250 and LRK54_RS05255 are separated by 75 nucleotides
LRK54_RS05255 and LRK54_RS05260 are separated by 110 nucleotides
LRK54_RS05260 and LRK54_RS05265 are separated by 212 nucleotides
LRK54_RS05245: LRK54_RS05245 - GTP-binding protein, at 1,124,140 to 1,125,498
_RS05245
LRK54_RS05250: LRK54_RS05250 - glutaredoxin family protein, at 1,125,618 to 1,125,848
_RS05250
LRK54_RS05255: LRK54_RS05255 - L-serine ammonia-lyase, at 1,125,924 to 1,127,306
_RS05255
LRK54_RS05260: LRK54_RS05260 - hypothetical protein, at 1,127,417 to 1,127,863
_RS05260
LRK54_RS05265: LRK54_RS05265 - site-specific DNA-methyltransferase, at 1,128,076 to 1,130,025
_RS05265
Group
Condition
LRK54
_RS05245
LRK54
_RS05250
LRK54
_RS05255
LRK54
_RS05260
LRK54
_RS05265
stress
R2A with bismuth(III) chloride 0.03125 mM
+0.3
-2.4
-2.3
-0.2
-0.4
stress
R2A with Cesium chloride 3.90625 mM
+0.2
-1.7
-1.5
-0.2
-0.7
stress
R2A with Cesium chloride 3.90625 mM
+0.3
-1.8
-1.6
-0.3
-0.3
stress
R2A with lithium chloride 15.625 mM
-0.1
-0.8
-1.8
-0.1
-0.6
stress
R2A with silver chloride 1 mM
-0.1
-1.5
-1.2
-0.2
-0.3
stress
R2A with lithium chloride 15.625 mM
+0.2
-0.7
-2.1
-0.1
-0.4
stress
R2A with ammonium iron(II) sulfate 2.5 mM
+0.1
-1.1
-1.2
-0.3
-0.4
stress
R2A with m-arsenite 0.078125 mM
-0.1
-1.1
-1.1
-0.0
-0.7
stress
R2A with Magnesium sulfate 3.90625 mM
+0.1
-1.3
-1.1
-0.2
-0.3
stress
R2A with ammonium iron(II) sulfate 2.5 mM
+0.1
-1.9
-1.0
+0.2
-0.3
stress
R2A with sulfate 250 mM
+0.1
-0.8
-1.1
-0.4
-0.5
stress
R2A with Magnesium sulfate 3.90625 mM
+0.1
-1.3
-1.2
-0.0
-0.3
stress
R2A with mercury (II) chloride 0.009765625 mM
-0.1
-1.2
-1.1
-0.1
-0.4
r2a_control
R2A control
+0.1
-1.1
-0.8
-0.5
-0.3
r2a_control
R2A control
+0.0
-1.0
-1.3
-0.1
-0.3
carbon source
Gly-Glu 20 mM
-0.1
-0.2
-1.4
-0.7
-0.3
r2a_control
R2A control
+0.1
-1.2
-1.0
-0.1
-0.4
stress
R2A with Uranyl acetate 2.5 mM
+0.2
-1.1
-1.3
+0.1
-0.4
stress
R2A with Manganese (II) chloride tetrahydrate 6.25 mM
+0.0
-0.1
-0.8
-1.1
-0.5
stress
R2A with sulfate 250 mM
+0.0
-1.2
-1.2
+0.0
-0.1
stress
R2A with Chloride 250 mM
+0.2
-1.2
-0.9
-0.1
-0.3
stress
R2A with m-arsenite 0.078125 mM
+0.2
-0.6
-1.1
-0.3
-0.5
stress
R2A with Chloride 250 mM
+0.3
-1.1
-0.9
-0.2
-0.3
r2a_control
R2A control
+0.0
-1.3
-0.8
+0.1
-0.2
stress
R2A with silver chloride 1 mM
+0.3
-0.9
-1.1
-0.2
-0.2
stress
R2A with Calcium chloride 125 mM
-0.2
-1.4
-0.7
+0.5
-0.3
stress
R2A with Chloride 250 mM
+0.2
-1.2
-0.8
+0.1
-0.4
stress
R2A with Barium chloride 1.25 mM
+0.0
-0.8
-1.0
+0.2
-0.5
stress
R2A with Ferric chloride 1.5625 mM
+0.1
-0.5
-1.3
+0.2
-0.5
anaerobic
Anaerobic, acetate donor; nitrate and iron electron acceptors
+0.3
-0.6
-0.8
-0.7
-0.2
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LRK54_RS05255
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