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Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK54_RS05215 and LRK54_RS05220 are separated by 102 nucleotides
LRK54_RS05220 and LRK54_RS05225 are separated by 130 nucleotides
LRK54_RS05225 and LRK54_RS05230 are separated by 370 nucleotides
LRK54_RS05230 and LRK54_RS05235 overlap by 4 nucleotides
LRK54_RS05215: LRK54_RS05215 - DedA family protein/thiosulfate sulfurtransferase GlpE, at 1,118,607 to 1,119,584
_RS05215
LRK54_RS05220: LRK54_RS05220 - MFS transporter, at 1,119,687 to 1,120,889
_RS05220
LRK54_RS05225: LRK54_RS05225 - polyprenyl synthetase family protein, at 1,121,020 to 1,122,021
_RS05225
LRK54_RS05230: LRK54_RS05230 - YceI family protein, at 1,122,392 to 1,123,009
_RS05230
LRK54_RS05235: LRK54_RS05235 - cytochrome b, at 1,123,006 to 1,123,587
_RS05235
Group
Condition
LRK54
_RS05215
LRK54
_RS05220
LRK54
_RS05225
LRK54
_RS05230
LRK54
_RS05235
stress
R2A with bismuth(III) chloride 0.03125 mM
-0.2
-2.6
N.D.
+0.3
-0.2
stress
R2A with Aluminum chloride 1.5625 mM
+0.0
+0.2
N.D.
+0.3
-3.0
stress
R2A with Aluminum chloride 1.5625 mM
-0.0
-0.1
N.D.
+0.2
-2.4
stress
R2A with Cesium chloride 3.90625 mM
-0.1
-1.8
N.D.
-0.2
-0.0
stress
R2A with Cesium chloride 3.90625 mM
-0.1
-2.0
N.D.
-0.3
+0.3
stress
R2A with lithium chloride 15.625 mM
+0.1
-2.0
N.D.
-0.3
+0.1
stress
R2A with Magnesium sulfate 3.90625 mM
-0.3
-1.3
N.D.
-0.2
+0.0
stress
R2A with Magnesium sulfate 3.90625 mM
+0.1
-1.6
N.D.
-0.2
+0.0
stress
R2A with lithium chloride 15.625 mM
-0.2
-1.3
N.D.
-0.2
+0.1
r2a_control
R2A control
-0.1
-1.2
N.D.
-0.4
+0.1
stress
R2A with sulfate 250 mM
-0.3
-1.2
N.D.
-0.2
+0.1
stress
R2A with ammonium iron(II) sulfate 2.5 mM
-0.2
-0.9
N.D.
+0.0
-0.5
stress
R2A with Ferric chloride 1.5625 mM
+0.0
-1.0
N.D.
-0.4
-0.1
stress
R2A with Barium chloride 1.25 mM
+0.0
-0.6
N.D.
-0.7
-0.2
stress
R2A with Chloride 250 mM
-0.1
-1.3
N.D.
-0.1
+0.1
stress
R2A with sodium bromide 250 mM
-0.3
-0.8
N.D.
-0.4
+0.1
stress
R2A with Aluminum chloride 3.125 mM
+0.3
+0.6
N.D.
+0.2
-2.5
anaerobic
Anaerobic, acetate donor; nitrate and iron electron acceptors
+0.1
-1.2
N.D.
-0.3
+0.2
r2a_control
R2A control
-0.0
-0.9
N.D.
-0.5
+0.1
stress
R2A with Chloride 250 mM
-0.0
-1.3
N.D.
-0.2
+0.2
stress
R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM
+0.1
+0.2
N.D.
-0.2
-1.3
r2a_control
R2A control
-0.1
-0.9
N.D.
-0.4
+0.1
stress
R2A with Barium chloride 1.25 mM
-0.0
-1.1
N.D.
-0.2
+0.2
stress
R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
-0.3
+0.4
N.D.
-0.0
-1.2
r2a_control
R2A control
+0.1
-1.0
N.D.
-0.1
+0.2
stress
R2A with selenate 31.25 mM
+0.6
-1.0
N.D.
-0.3
-0.0
stress
R2A with Aluminum chloride 3.125 mM
-0.0
+0.6
N.D.
+0.4
-1.7
stress
R2A with silver chloride 1 mM
-0.0
-1.3
N.D.
+0.3
+0.6
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.4
-0.2
N.D.
+0.3
-0.6
phage
phage 31.1
-0.2
-0.5
N.D.
-0.0
+0.7
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