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Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK54_RS04425 and LRK54_RS04430 are separated by 85 nucleotides
LRK54_RS04430 and LRK54_RS04435 are separated by 135 nucleotides
LRK54_RS04435 and LRK54_RS04440 are separated by 10 nucleotides
LRK54_RS04440 and LRK54_RS04445 are separated by 103 nucleotides
LRK54_RS04425: LRK54_RS04425 - ABC transporter permease, at 935,577 to 936,833
_RS04425
LRK54_RS04430: LRK54_RS04430 - ABC transporter permease, at 936,919 to 938,232
_RS04430
LRK54_RS04435: LRK54_RS04435 - ABC transporter permease, at 938,368 to 939,609
_RS04435
LRK54_RS04440: LRK54_RS04440 - ABC transporter permease, at 939,620 to 940,930
_RS04440
LRK54_RS04445: LRK54_RS04445 - ABC transporter ATP-binding protein, at 941,034 to 941,750
_RS04445
Group
Condition
LRK54
_RS04425
LRK54
_RS04430
LRK54
_RS04435
LRK54
_RS04440
LRK54
_RS04445
biofilm assay; biofilm sample
biofilm; Day2; NLDM; Aluminum chloride 1mM
-0.4
+0.0
-0.0
-0.1
-3.2
stress
R2A with sodium bromide 250 mM
-0.1
-0.5
-0.7
-0.3
-1.5
stress
R2A with Uranyl acetate 2.5 mM
-0.3
-0.6
-0.2
-0.1
-1.9
stress
R2A_PIPES with Aluminum chloride 1.125 mM
+0.0
+0.1
-0.5
-0.8
-1.6
stress
R2A with Uranyl acetate 2.5 mM
-0.2
-0.3
-0.1
-0.0
-2.2
stress
R2A with Barium chloride 1.25 mM
-0.2
-0.2
-0.1
-0.2
-1.5
carbon source
Gly-Glu 20 mM
-0.1
-0.3
-0.1
-0.2
-1.4
stress
R2A with bismuth(III) chloride 0.03125 mM
-0.6
-0.5
-0.2
+0.1
-0.9
stress
R2A with selenate 31.25 mM
+0.0
-0.3
-0.1
-0.1
-1.5
stress
R2A with sodium bromide 250 mM
-0.2
-0.2
-0.4
-0.4
-0.6
r2a_control
R2A control
-0.2
-0.3
-0.1
-0.0
-1.3
stress
R2A with Magnesium sulfate 3.90625 mM
-0.4
-0.5
-0.1
-0.1
-0.8
stress
R2A with Magnesium sulfate 3.90625 mM
-0.2
-0.5
-0.1
-0.1
-1.1
stress
R2A with Cesium chloride 3.90625 mM
-0.2
-0.4
-0.1
-0.1
-1.1
stress
R2A with Calcium chloride 250 mM
-0.3
-0.5
-0.1
-0.0
-1.0
r2a_control
R2A control
-0.2
-0.3
-0.1
+0.1
-1.4
stress
R2A with silver chloride 1 mM
-0.2
-0.1
+0.1
-0.1
-1.4
stress
R2A with mercury (II) chloride 0.009765625 mM
-0.3
-0.3
-0.0
+0.1
-1.1
stress
R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM
+1.0
+0.7
-0.1
-0.4
-1.9
stress
R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM
+0.6
+0.6
-0.4
-0.4
-1.0
stress
R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM
+0.5
+0.2
-0.0
-0.2
-1.1
biofilm assay; planktonic sample
Planktonic; Day4; SGW; pH7
-0.2
+0.2
-0.7
-0.3
+0.6
stress
R2A with arsenate 31.25 mM
+0.5
+0.5
-0.3
-0.3
-0.4
carbon source
D-Glucose-6-Phosphate 20 mM
-0.6
+0.0
+0.1
+0.1
+1.0
stress
R2A with m-arsenite 0.078125 mM
+0.7
+0.6
+0.2
+0.1
-0.7
carbon source
D-Glucose-6-Phosphate 20 mM
-0.2
-0.2
-0.1
+0.1
+1.4
carbon source
a-Cyclodextrin 20 mM
-0.4
+0.2
-0.1
+0.0
+1.6
stress
R2A with Cobalt chloride 0.15625 mM
+0.2
+0.1
+0.0
+0.1
+1.6
stress
R2A with Cobalt chloride 0.15625 mM
+0.2
+0.3
+0.2
+0.2
+1.2
stress
R2A with Nickel (II) chloride 0.3125 mM
+0.5
+0.3
+1.1
+0.9
+2.8
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