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Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK54_RS04270 and LRK54_RS04275 are separated by 4 nucleotides
LRK54_RS04275 and LRK54_RS04280 overlap by 4 nucleotides
LRK54_RS04280 and LRK54_RS04285 are separated by 233 nucleotides
LRK54_RS04285 and LRK54_RS04290 are separated by 51 nucleotides
LRK54_RS04270: LRK54_RS04270 - cobalamin-binding protein, at 905,470 to 906,294
_RS04270
LRK54_RS04275: LRK54_RS04275 - secondary thiamine-phosphate synthase enzyme YjbQ, at 906,299 to 906,739
_RS04275
LRK54_RS04280: LRK54_RS04280 - pyridoxamine 5'-phosphate oxidase, at 906,736 to 907,323
_RS04280
LRK54_RS04285: LRK54_RS04285 - kinase, at 907,557 to 908,387
_RS04285
LRK54_RS04290: LRK54_RS04290 - dodecin family protein, at 908,439 to 908,642
_RS04290
Group
Condition
LRK54
_RS04270
LRK54
_RS04275
LRK54
_RS04280
LRK54
_RS04285
LRK54
_RS04290
pH
R2A_PIPES pH 4
-0.0
+0.0
N.D.
-1.8
N.D.
pH
R2A_PIPES pH 4
+0.3
-0.2
N.D.
-1.7
N.D.
stress
R2A with Manganese (II) chloride tetrahydrate 6.25 mM
+0.1
+0.1
N.D.
-1.5
N.D.
stress
R2A with bismuth(III) chloride 0.03125 mM
+0.4
-0.2
N.D.
-1.5
N.D.
stress
R2A with Manganese (II) chloride tetrahydrate 6.25 mM
+0.1
+0.1
N.D.
-1.2
N.D.
stress
R2A with Nickel (II) chloride 0.3125 mM
-0.0
+0.2
N.D.
-1.0
N.D.
stress
R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
-0.7
-0.0
N.D.
+0.9
N.D.
stress
R2A with selenate 31.25 mM
+0.0
-0.5
N.D.
+0.8
N.D.
stress
R2A with sodium bromide 250 mM
-0.3
-0.3
N.D.
+1.0
N.D.
stress
R2A with Strontium chloride 3.90625 mM
-0.3
-0.4
N.D.
+1.0
N.D.
stress
R2A with nitrate 250 mM
-0.2
-0.2
N.D.
+0.8
N.D.
stress
R2A with Ferric chloride 1.5625 mM
-0.1
-0.3
N.D.
+0.8
N.D.
carbon source
a-Cyclodextrin 20 mM
-0.2
-0.6
N.D.
+1.2
N.D.
stress
R2A with nitrite 50 mM
-0.3
-0.1
N.D.
+0.9
N.D.
stress
R2A with nitrate 250 mM
-0.1
-0.3
N.D.
+1.0
N.D.
stress
R2A with lithium chloride 15.625 mM
-0.0
-0.3
N.D.
+0.9
N.D.
stress
R2A with m-arsenite 0.078125 mM
-0.3
-0.2
N.D.
+1.2
N.D.
stress
R2A with lithium chloride 15.625 mM
-0.3
-0.1
N.D.
+1.0
N.D.
stress
R2A with Magnesium sulfate 3.90625 mM
-0.1
-0.2
N.D.
+1.0
N.D.
stress
R2A with m-arsenite 0.078125 mM
-0.3
-0.1
N.D.
+1.2
N.D.
stress
R2A with Chloride 250 mM
+0.0
-0.2
N.D.
+1.0
N.D.
stress
R2A with silver chloride 1 mM
-0.1
-0.2
N.D.
+1.1
N.D.
carbon source
Gly-Glu 20 mM
-0.2
-0.1
N.D.
+1.0
N.D.
stress
R2A with beryllium sulfate tetrahydrate 1.953125 mM
-0.1
-0.2
N.D.
+1.2
N.D.
stress
R2A with silver chloride 1 mM
-0.0
-0.2
N.D.
+1.2
N.D.
stress
R2A with Calcium chloride 250 mM
-0.2
-0.2
N.D.
+1.4
N.D.
stress
R2A with beryllium sulfate tetrahydrate 1.953125 mM
-0.0
-0.2
N.D.
+1.3
N.D.
stress
R2A with Cesium chloride 3.90625 mM
-0.3
-0.4
N.D.
+1.7
N.D.
stress
R2A with Cesium chloride 3.90625 mM
-0.4
-0.3
N.D.
+1.7
N.D.
stress
R2A with Aluminum chloride 3.125 mM
+0.7
-0.1
N.D.
+1.1
N.D.
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