Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS03670 and LRK54_RS03675 are separated by 139 nucleotidesLRK54_RS03675 and LRK54_RS03680 are separated by 81 nucleotidesLRK54_RS03680 and LRK54_RS03685 are separated by 54 nucleotidesLRK54_RS03685 and LRK54_RS03690 are separated by 114 nucleotides LRK54_RS03670: LRK54_RS03670 - acyl-CoA thioesterase, at 779,177 to 779,665 _RS03670 LRK54_RS03675: LRK54_RS03675 - redox-regulated ATPase YchF, at 779,805 to 780,893 _RS03675 LRK54_RS03680: LRK54_RS03680 - aminoacyl-tRNA hydrolase, at 780,975 to 781,556 _RS03680 LRK54_RS03685: LRK54_RS03685 - 50S ribosomal protein L25/general stress protein Ctc, at 781,611 to 782,276 _RS03685 LRK54_RS03690: LRK54_RS03690 - ribose-phosphate diphosphokinase, at 782,391 to 783,332 _RS03690
Group Condition LRK54_RS03670 LRK54_RS03675 LRK54_RS03680 LRK54_RS03685 LRK54_RS03690
carbon source Gly-Glu 20 mM -3.1 -1.6 N.D. N.D. N.D.
carbon source Gly-Glu 20 mM -2.6 -1.5 N.D. N.D. N.D.
stress R2A with copper (II) chloride 0.15625 mM -0.3 -2.9 N.D. N.D. N.D.
stress R2A with nitrite 25 mM -0.2 -2.7 N.D. N.D. N.D.
stress R2A with Zinc chloride 0.3125 mM -0.3 -2.6 N.D. N.D. N.D.
r2a_control R2A control -0.0 -2.9 N.D. N.D. N.D.
stress R2A with copper (II) chloride 0.15625 mM -0.3 -2.6 N.D. N.D. N.D.
stress R2A with Nickel (II) chloride 0.15625 mM -0.2 -2.6 N.D. N.D. N.D.
r2a_control R2A control -0.1 -2.7 N.D. N.D. N.D.
pH R2A pH6 -0.0 -2.8 N.D. N.D. N.D.
stress R2A with Zinc chloride 0.625 mM -0.2 -2.5 N.D. N.D. N.D.
stress R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM -0.0 -2.7 N.D. N.D. N.D.
r2a_control R2A control +0.0 -2.8 N.D. N.D. N.D.
pH R2A pH7 +0.2 -2.8 N.D. N.D. N.D.
r2a_control R2A control +0.0 -2.7 N.D. N.D. N.D.
r2a_control R2A control -0.2 -2.4 N.D. N.D. N.D.
stress R2A with Aluminum chloride 3.125 mM -0.1 -2.5 N.D. N.D. N.D.
pH R2A pH5 +0.0 -2.6 N.D. N.D. N.D.
stress R2A with Aluminum chloride 1.5625 mM +0.0 -2.5 N.D. N.D. N.D.
stress R2A with Uranyl acetate 2.5 mM +0.1 -2.5 N.D. N.D. N.D.
stress R2A with Cadmium chloride hemipentahydrate 0.01953125 mM +0.1 -2.5 N.D. N.D. N.D.
biofilm assay; planktonic sample planktonic; Day2; NLDM; +0.2 -2.7 N.D. N.D. N.D.
stress R2A with Cobalt chloride 0.0390625 mM +0.3 -2.6 N.D. N.D. N.D.
stress R2A with Cobalt chloride 0.0390625 mM +0.1 -2.4 N.D. N.D. N.D.
carbon source casaminos 2 mg/mL +0.2 -2.4 N.D. N.D. N.D.
stress R2A with Other_metal_mix 1 X +0.3 -2.4 N.D. N.D. N.D.
biofilm assay; planktonic sample planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.6 -2.4 N.D. N.D. N.D.
stress R2A with silver chloride 1 mM +0.9 -2.0 N.D. N.D. N.D.
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +1.0 -1.8 N.D. N.D. N.D.
stress R2A with Cobalt chloride 0.15625 mM -0.4 +2.6 N.D. N.D. N.D.
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