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Protein
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Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK54_RS03120 and LRK54_RS03125 are separated by 111 nucleotides
LRK54_RS03125 and LRK54_RS03130 are separated by 159 nucleotides
LRK54_RS03130 and LRK54_RS03135 are separated by 96 nucleotides
LRK54_RS03135 and LRK54_RS03140 are separated by 65 nucleotides
LRK54_RS03120: LRK54_RS03120 - protein translocase subunit SecD, at 672,205 to 674,088
_RS03120
LRK54_RS03125: LRK54_RS03125 - preprotein translocase subunit YajC, at 674,200 to 674,532
_RS03125
LRK54_RS03130: LRK54_RS03130 - tRNA guanosine(34) transglycosylase Tgt, at 674,692 to 675,819
_RS03130
LRK54_RS03135: LRK54_RS03135 - tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA, at 675,916 to 676,947
_RS03135
LRK54_RS03140: LRK54_RS03140 - response regulator transcription factor, at 677,013 to 677,615
_RS03140
Group
Condition
LRK54
_RS03120
LRK54
_RS03125
LRK54
_RS03130
LRK54
_RS03135
LRK54
_RS03140
stress
R2A with Nickel (II) chloride 0.3125 mM
N.D.
-2.9
-2.0
-0.7
+0.1
stress
R2A with m-arsenite 0.078125 mM
N.D.
-2.4
-2.4
-0.3
-0.1
stress
R2A with Magnesium sulfate 3.90625 mM
N.D.
-2.1
-2.3
-0.3
-0.1
stress
R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM
N.D.
-2.9
-1.6
-0.3
+0.0
stress
R2A with Cesium chloride 3.90625 mM
N.D.
-1.4
-2.2
-0.7
-0.3
r2a_control
R2A control
N.D.
-3.7
-1.0
+0.1
-0.1
r2a_control
R2A control
N.D.
-3.8
-0.8
-0.1
-0.1
stress
R2A with Cesium chloride 3.90625 mM
N.D.
-1.9
-2.2
-0.4
-0.1
r2a_control
R2A control
N.D.
-3.6
-0.8
-0.0
-0.2
r2a_control
R2A control
N.D.
-3.7
-0.6
+0.0
-0.2
r2a_control
R2A control
N.D.
-3.7
-0.9
+0.2
+0.0
r2a_control
R2A control
N.D.
-3.7
-0.8
+0.2
-0.1
stress
R2A with Aluminum chloride 1.5625 mM
N.D.
-4.0
-0.3
+0.1
-0.1
stress
R2A with Manganese (II) chloride tetrahydrate 0.625 mM
N.D.
-3.6
-0.6
-0.0
-0.0
stress
R2A with Manganese (II) chloride tetrahydrate 1.25 mM
N.D.
-3.6
-0.6
-0.1
+0.1
r2a_control
R2A control
N.D.
-3.6
-0.7
+0.2
-0.1
stress
R2A with Magnesium sulfate 3.90625 mM
N.D.
-2.1
-1.7
-0.3
-0.1
r2a_control
R2A control
N.D.
-3.4
-0.6
-0.0
-0.1
r2a_control
R2A control
N.D.
-3.7
-0.7
+0.2
+0.1
r2a_control
R2A control
N.D.
-3.5
-0.7
+0.0
+0.0
stress
R2A with Manganese (II) chloride tetrahydrate 0.625 mM
N.D.
-3.6
-0.6
+0.0
-0.0
r2a_control
R2A control
N.D.
-2.8
-0.8
-0.4
+0.0
stress
R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM
N.D.
-2.7
-1.4
+0.0
+0.1
stress
R2A with silver chloride 1 mM
N.D.
-1.8
-1.7
-0.5
+0.2
carbon source
D-Glucose-6-Phosphate 20 mM
N.D.
-2.4
-0.9
-0.8
+0.3
stress
R2A with Manganese (II) chloride tetrahydrate 0.15625 mM
N.D.
-3.4
-0.5
+0.2
-0.0
r2a_control
R2A control
N.D.
-3.3
-0.6
+0.3
-0.0
r2a_control
R2A control
N.D.
-3.2
-0.7
+0.3
+0.0
stress
R2A with chromate 0.0048828125 mM
N.D.
+1.3
+0.3
+2.5
-0.4
stress
R2A with chromate 0.0048828125 mM
N.D.
+1.5
+1.1
+2.3
+0.2
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LRK54_RS03130
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