Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS03060 and LRK54_RS03065 are separated by 177 nucleotidesLRK54_RS03065 and LRK54_RS03070 are separated by 152 nucleotidesLRK54_RS03070 and LRK54_RS03075 are separated by 1 nucleotidesLRK54_RS03075 and LRK54_RS03080 are separated by 74 nucleotides LRK54_RS03060: LRK54_RS03060 - GNAT family N-acetyltransferase, at 658,698 to 659,246 _RS03060 LRK54_RS03065: LRK54_RS03065 - M13 family metallopeptidase, at 659,424 to 661,469 _RS03065 LRK54_RS03070: LRK54_RS03070 - 2-dehydropantoate 2-reductase, at 661,622 to 662,542 _RS03070 LRK54_RS03075: LRK54_RS03075 - acyltransferase, at 662,544 to 663,458 _RS03075 LRK54_RS03080: LRK54_RS03080 - cysteine desulfurase, at 663,533 to 664,777 _RS03080
Group Condition LRK54_RS03060 LRK54_RS03065 LRK54_RS03070 LRK54_RS03075 LRK54_RS03080
phage 4B-T1 -0.1 -0.2 -0.2 -0.8 N.D.
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.1 -0.2 -0.4 -1.0 N.D.
phage 1E-T2 -0.4 -0.1 -0.0 -0.7 N.D.
biofilm assay; biofilm sample biofilm; Day2; NLDM; -0.1 -0.0 -0.7 -0.3 N.D.
biofilm assay; planktonic sample planktonic; Day1; NLDM; -0.0 -0.1 -0.4 -0.6 N.D.
phage S3-T2 -0.2 -0.2 +0.2 -0.6 N.D.
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.8 +0.2 +0.1 -0.3 N.D.
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 -0.3 -0.0 +0.5 -0.9 N.D.
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors -0.6 +0.2 +0.1 -0.4 N.D.
phage 2A-T2 -0.5 -0.0 +0.4 -0.5 N.D.
stress R2A_PIPES with Cadmium chloride 16 uM -0.2 -0.1 +0.2 -0.5 N.D.
stress R2A with chromate 0.0048828125 mM -0.6 +0.3 -0.5 +0.2 N.D.
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x +0.3 -0.2 -0.3 -0.3 N.D.
phage 2A-T1 -0.0 -0.2 +0.3 -0.6 N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.2 -0.2 +0.4 -0.7 N.D.
phage S3-T1 -0.5 -0.1 +0.4 +0.1 N.D.
stress R2A with Cobalt chloride 0.15625 mM -0.4 +0.1 -0.4 +0.5 N.D.
stress R2A with Cobalt chloride 0.15625 mM -0.5 +0.1 -0.2 +0.5 N.D.
stress R2A with Selective_ion_mix_1 1 X +0.2 -0.2 -0.4 +0.4 N.D.
carbon source a-Cyclodextrin 20 mM -0.7 +0.2 +0.1 +0.4 N.D.
stress R2A_PIPES with Nickel (II) chloride 424 uM +1.0 -0.1 +0.4 -0.6 N.D.
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM +0.2 +0.2 -0.1 +0.7 N.D.
stress R2A with bismuth(III) chloride 0.03125 mM -0.2 +0.3 +0.6 +0.4 N.D.
stress R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM -0.1 +0.2 +0.4 +0.6 N.D.
stress R2A with arsenate 31.25 mM -0.0 +0.3 +0.3 +0.5 N.D.
stress R2A with Chloride 250 mM +0.5 +0.2 +0.4 +0.0 N.D.
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM +0.2 +0.1 +0.3 +0.6 N.D.
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.6 +0.2 +0.0 +0.4 N.D.
r2a_control R2A control +0.1 +0.4 +0.3 +0.6 N.D.
stress R2A with mercury (II) chloride 0.009765625 mM +0.4 +0.3 +0.5 +0.3 N.D.
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