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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK54_RS02895 and LRK54_RS02900 are separated by 142 nucleotides
LRK54_RS02900 and LRK54_RS02905 are separated by 182 nucleotides
LRK54_RS02905 and LRK54_RS02910 are separated by 102 nucleotides
LRK54_RS02910 and LRK54_RS02915 are separated by 207 nucleotides
LRK54_RS02895: LRK54_RS02895 - rhomboid family intramembrane serine protease, at 623,451 to 624,068
_RS02895
LRK54_RS02900: LRK54_RS02900 - C40 family peptidase, at 624,211 to 624,900
_RS02900
LRK54_RS02905: LRK54_RS02905 - YggS family pyridoxal phosphate-dependent enzyme, at 625,083 to 625,817
_RS02905
LRK54_RS02910: LRK54_RS02910 - M20 family metallopeptidase, at 625,920 to 627,335
_RS02910
LRK54_RS02915: LRK54_RS02915 - helix-hairpin-helix domain-containing protein, at 627,543 to 627,911
_RS02915
Group
Condition
LRK54
_RS02895
LRK54
_RS02900
LRK54
_RS02905
LRK54
_RS02910
LRK54
_RS02915
r2a_control
R2A control
-4.2
+1.4
+0.2
-0.3
N.D.
r2a_control
R2A control
-3.5
+1.5
-0.4
-0.5
N.D.
r2a_control
R2A control
-4.1
+1.6
-0.0
-0.2
N.D.
r2a_control
R2A control
-4.0
+1.5
+0.1
-0.3
N.D.
r2a_control
R2A control
-4.2
+1.7
+0.1
-0.2
N.D.
r2a_control
R2A control
-4.1
+1.6
+0.2
-0.2
N.D.
r2a_control
R2A control
-4.2
+1.7
+0.2
-0.2
N.D.
r2a_control
R2A control
-4.1
+1.6
+0.3
-0.3
N.D.
r2a_control
R2A control
-4.0
+1.7
+0.1
-0.2
N.D.
r2a_control
R2A control
-4.0
+1.8
-0.1
-0.2
N.D.
r2a_control
R2A control
-4.1
+1.6
+0.3
-0.2
N.D.
r2a_control
R2A control
-4.2
+1.7
+0.3
-0.2
N.D.
r2a_control
R2A control
-4.0
+1.6
+0.3
-0.2
N.D.
stress
R2A with nitrite 50 mM
-3.5
+1.7
+0.6
-1.1
N.D.
stress
R2A with lithium chloride 15.625 mM
-2.9
+2.2
-1.4
-0.2
N.D.
r2a_control
R2A control
-3.9
+1.6
+0.2
-0.2
N.D.
r2a_control
R2A control
-4.0
+1.9
+0.0
-0.2
N.D.
r2a_control
R2A control
-4.0
+1.7
+0.3
-0.2
N.D.
stress
R2A with lithium chloride 15.625 mM
-3.2
+2.1
-1.0
-0.2
N.D.
r2a_control
R2A control
-4.0
+1.8
+0.2
-0.1
N.D.
r2a_control
R2A control
-3.9
+1.8
+0.2
-0.2
N.D.
r2a_control
R2A control
-3.9
+1.7
+0.3
-0.2
N.D.
stress
R2A with nitrite 50 mM
-2.8
+1.8
+0.4
-0.9
N.D.
stress
R2A with Nickel (II) chloride 0.3125 mM
-3.1
+2.3
+0.4
-0.6
N.D.
stress
R2A with Cesium chloride 3.90625 mM
-3.0
+2.7
-0.4
-0.2
N.D.
stress
R2A with Cesium chloride 3.90625 mM
-3.1
+2.8
-0.2
-0.2
N.D.
stress
R2A with m-arsenite 0.078125 mM
-3.3
+2.9
+0.2
-0.3
N.D.
stress
R2A with m-arsenite 0.078125 mM
-3.3
+2.8
+0.5
-0.3
N.D.
stress
R2A with Calcium chloride 250 mM
-2.9
+2.0
+0.4
+1.0
N.D.
stress
R2A with bismuth(III) chloride 0.03125 mM
-2.1
+4.2
-0.4
-0.2
N.D.
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