Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS02865 and LRK54_RS02870 are separated by 178 nucleotidesLRK54_RS02870 and LRK54_RS02875 overlap by 4 nucleotidesLRK54_RS02875 and LRK54_RS02880 are separated by 118 nucleotidesLRK54_RS02880 and LRK54_RS02885 are separated by 234 nucleotides LRK54_RS02865: LRK54_RS02865 - type II toxin-antitoxin system HicA family toxin, at 613,844 to 614,020 _RS02865 LRK54_RS02870: LRK54_RS02870 - DUF502 domain-containing protein, at 614,199 to 614,876 _RS02870 LRK54_RS02875: LRK54_RS02875 - M14 family metallopeptidase, at 614,873 to 616,705 _RS02875 LRK54_RS02880: LRK54_RS02880 - M13 family peptidase, at 616,824 to 618,947 _RS02880 LRK54_RS02885: LRK54_RS02885 - RNA polymerase-associated protein RapA, at 619,182 to 622,022 _RS02885
Group Condition LRK54_RS02865 LRK54_RS02870 LRK54_RS02875 LRK54_RS02880 LRK54_RS02885
stress R2A with Calcium chloride 250 mM -0.1 -1.2 +0.1 -0.5 -1.3
stress R2A with lead(II) chloride 0.625 mM -1.1 -1.1 -0.0 -0.2 -0.6
stress R2A with copper (II) chloride 0.3125 mM -1.4 -1.4 -0.1 +0.1 -0.0
stress R2A with Other_metal_mix 1 X -1.9 -1.0 -0.0 +0.2 -0.1
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM -0.8 -0.6 -0.1 -0.7 -0.4
stress R2A with Aluminum chloride 3.125 mM -0.6 -1.6 +0.0 +0.3 -0.9
r2a_control R2A control -1.2 -1.5 -0.0 +0.2 -0.0
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 -1.5 -0.7 -0.3 +0.1 -0.1
stress R2A with m-arsenite 0.078125 mM -1.6 -1.6 +0.2 +0.4 +0.1
r2a_control R2A control -0.7 -1.8 -0.0 -0.0 +0.0
stress R2A with Selective_ion_mix_1 1 X -1.9 -0.6 -0.1 -0.1 +0.2
carbon source a-Cyclodextrin 20 mM -1.3 -0.6 +0.2 +0.1 -0.9
biofilm assay; biofilm sample biofilm; Day2; NLDM; -1.8 -0.7 +0.3 +0.2 -0.3
stress R2A with arsenate 31.25 mM -1.9 -0.6 +0.1 +0.1 +0.1
pH R2A pH6 -1.1 -1.4 +0.1 +0.1 +0.1
stress R2A with nitrate 125 mM -1.3 -1.3 +0.2 +0.1 +0.3
phage 3E-T1 -1.9 +0.3 -0.1 +0.1 -0.3
stress R2A with silver chloride 1 mM +0.4 -2.1 -0.1 -0.1 -0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -1.8 -0.6 +0.0 +0.0 +0.4
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -1.2 -1.4 +0.4 -0.0 +0.3
stress R2A with m-arsenite 0.0390625 mM -0.7 -1.6 +0.1 +0.2 +0.1
r2a_control R2A control +0.2 -2.3 -0.0 -0.0 +0.3
stress R2A with Zinc chloride 0.625 mM -1.1 -1.1 +0.1 +0.1 +0.2
stress R2A with nitrite 25 mM -0.5 -1.5 +0.2 +0.3 -0.3
stress R2A with bismuth(III) chloride 0.03125 mM +0.8 -1.7 +0.1 -0.4 -0.1
stress R2A with silver chloride 1 mM +0.6 -1.7 +0.2 -0.1 -0.1
stress R2A with Nickel (II) chloride 0.3125 mM -0.8 -1.6 -0.0 -0.1 +1.3
stress R2A with lithium chloride 15.625 mM +0.5 -1.5 -0.1 -0.1 +0.3
stress R2A with Gallium(III)chloride 0.78125 mM +0.9 -0.9 +0.1 -0.3 -0.6
stress R2A with Nickel (II) chloride 0.3125 mM -0.1 -1.0 +0.2 +0.1 +2.4
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