Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS02845 and LRK54_RS02850 overlap by 4 nucleotidesLRK54_RS02850 and LRK54_RS02855 are separated by 6 nucleotidesLRK54_RS02855 and LRK54_RS02860 are separated by 764 nucleotidesLRK54_RS02860 and LRK54_RS02865 are separated by 32 nucleotides LRK54_RS02845: LRK54_RS02845 - virulence RhuM family protein, at 608,834 to 609,844 _RS02845 LRK54_RS02850: LRK54_RS02850 - AAA family ATPase, at 609,841 to 611,001 _RS02850 LRK54_RS02855: LRK54_RS02855 - type I restriction-modification system subunit M, at 611,008 to 612,627 _RS02855 LRK54_RS02860: LRK54_RS02860 - type II toxin-antitoxin system HicB family antitoxin, at 613,392 to 613,811 _RS02860 LRK54_RS02865: LRK54_RS02865 - type II toxin-antitoxin system HicA family toxin, at 613,844 to 614,020 _RS02865
Group Condition LRK54_RS02845 LRK54_RS02850 LRK54_RS02855 LRK54_RS02860 LRK54_RS02865
stress R2A with arsenate 31.25 mM -0.3 -0.1 -2.5 N.D. -1.9
stress R2A with nitrate 125 mM -0.6 -0.2 -2.4 N.D. -1.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.2 -0.2 -1.9 N.D. -1.8
stress R2A with Other_metal_mix 1 X -0.2 -0.1 -2.0 N.D. -1.9
stress R2A with Nickel (II) chloride 0.3125 mM -0.5 -0.4 -2.3 N.D. -0.8
stress R2A with m-arsenite 0.078125 mM -0.5 -0.0 -1.8 N.D. -1.6
pH R2A pH5 -0.3 -0.1 -2.6 N.D. -0.8
r2a_control R2A control -0.2 -0.2 -2.0 N.D. -1.2
pH R2A pH7 +0.0 -0.1 -2.3 N.D. -1.3
r2a_control R2A control -0.3 -0.2 -2.3 N.D. -0.8
pH R2A pH6 -0.1 -0.1 -2.0 N.D. -1.4
stress R2A with Cobalt chloride 0.078125 mM -0.2 -0.1 -2.1 N.D. -1.2
stress R2A with Nickel (II) chloride 0.15625 mM -0.3 -0.3 -2.5 N.D. -0.5
stress R2A with arsenate 15.625 mM -0.5 -0.2 -2.3 N.D. -0.5
pH R2A pH6 -0.2 -0.1 -2.1 N.D. -1.1
stress R2A with Other_metal_mix 1 X -0.2 -0.1 -2.0 N.D. -1.2
stress R2A with copper (II) chloride 0.15625 mM -0.1 -0.0 -2.0 N.D. -1.2
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM -0.3 -0.0 -2.6 N.D. -0.5
pH R2A pH7 -0.3 -0.1 -2.3 N.D. -0.6
stress R2A with m-arsenite 0.0390625 mM -0.4 -0.2 -2.0 N.D. -0.7
r2a_control R2A control -0.1 -0.3 -2.6 N.D. -0.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; -0.1 +0.3 -1.3 N.D. -1.8
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.3 +0.1 -1.9 N.D. -1.2
carbon source pyruvate 20 mM +0.1 -0.2 -2.8 N.D. +0.5
pH R2A_PIPES pH 4 -0.2 -0.1 -2.6 N.D. +0.7
stress R2A with nitrate 250 mM -0.2 -0.1 -2.5 N.D. +0.8
pH R2A_PIPES pH 4 -0.3 +0.1 -2.3 N.D. +0.7
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -0.2 -0.1 -2.4 N.D. +0.8
stress R2A with Gallium(III)chloride 0.78125 mM -0.3 -0.2 -2.1 N.D. +0.9
stress R2A with Selective_ion_mix_1 1 X +0.1 +0.6 +0.9 N.D. -1.9
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