Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS02570 and LRK54_RS02575 are separated by 87 nucleotidesLRK54_RS02575 and LRK54_RS02580 are separated by 30 nucleotidesLRK54_RS02580 and LRK54_RS02585 overlap by 4 nucleotidesLRK54_RS02585 and LRK54_RS02590 are separated by 84 nucleotides LRK54_RS02570: LRK54_RS02570 - SDR family oxidoreductase, at 553,832 to 554,623 _RS02570 LRK54_RS02575: LRK54_RS02575 - aldehyde dehydrogenase, at 554,711 to 556,198 _RS02575 LRK54_RS02580: LRK54_RS02580 - carbonate dehydratase, at 556,229 to 556,894 _RS02580 LRK54_RS02585: LRK54_RS02585 - Rid family hydrolase, at 556,891 to 557,322 _RS02585 LRK54_RS02590: LRK54_RS02590 - hypothetical protein, at 557,407 to 557,664 _RS02590
Group Condition LRK54_RS02570 LRK54_RS02575 LRK54_RS02580 LRK54_RS02585 LRK54_RS02590
carbon source pyruvate 20 mM -2.7 -0.1 N.D. -0.3 N.D.
carbon source pyruvate 20 mM -2.5 -0.1 N.D. -0.5 N.D.
carbon source D-Glucose-6-Phosphate 20 mM -1.5 -0.2 N.D. -0.8 N.D.
carbon source D-Raffinose 20 mM -1.7 -0.2 N.D. -0.5 N.D.
carbon source D-Maltose 20 mM -1.7 -0.1 N.D. -0.4 N.D.
stress R2A with Nickel (II) chloride 0.3125 mM -2.0 -0.1 N.D. -0.0 N.D.
carbon source acetate 20 mM -1.3 -0.2 N.D. -0.4 N.D.
carbon source NAG 20 mM -1.5 -0.0 N.D. -0.4 N.D.
carbon source D-Glucose-6-Phosphate 20 mM -1.5 -0.1 N.D. -0.4 N.D.
carbon source D-Raffinose 20 mM -1.5 +0.0 N.D. -0.3 N.D.
carbon source D-Trehalose 20 mM -1.2 -0.2 N.D. -0.3 N.D.
carbon source D-Maltose 20 mM -1.5 +0.0 N.D. -0.2 N.D.
stress R2A with Chloride 250 mM -1.3 -0.2 N.D. -0.0 N.D.
carbon source acetate 20 mM -1.0 -0.0 N.D. -0.4 N.D.
carbon source D-Glucose 20 mM -0.9 -0.3 N.D. -0.2 N.D.
carbon source D-Glucose 20 mM -1.0 -0.1 N.D. -0.3 N.D.
carbon source NAG 20 mM -1.3 -0.1 N.D. -0.0 N.D.
carbon source a-Cyclodextrin 20 mM -0.8 -0.0 N.D. -0.4 N.D.
carbon source D-Glucosamine Hydrochloride 20 mM -1.2 +0.1 N.D. -0.2 N.D.
carbon source D-Trehalose 20 mM -1.2 -0.0 N.D. -0.0 N.D.
stress R2A with Chloride 250 mM -1.0 -0.1 N.D. -0.1 N.D.
carbon source D-Glucosamine Hydrochloride 20 mM -0.9 -0.1 N.D. -0.1 N.D.
stress R2A with Nickel (II) chloride 0.3125 mM -0.5 -0.0 N.D. -0.6 N.D.
stress R2A with sodium bromide 250 mM -1.1 +0.1 N.D. -0.1 N.D.
r2a_control R2A control -0.8 -0.2 N.D. -0.1 N.D.
stress R2A with Chloride 250 mM -0.7 -0.1 N.D. -0.2 N.D.
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.8 -0.1 N.D. -0.2 N.D.
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.9 +0.1 N.D. +0.3 N.D.
phage phage 31.1 +0.4 -0.1 N.D. +0.6 N.D.
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM +1.3 +0.1 N.D. +0.2 N.D.
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