Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS02450 and LRK54_RS02455 are separated by 109 nucleotidesLRK54_RS02455 and LRK54_RS02460 overlap by 4 nucleotidesLRK54_RS02460 and LRK54_RS02465 overlap by 4 nucleotidesLRK54_RS02465 and LRK54_RS02470 are separated by 92 nucleotides LRK54_RS02450: LRK54_RS02450 - GTP cyclohydrolase FolE2, at 532,432 to 533,379 _RS02450 LRK54_RS02455: LRK54_RS02455 - squalene/phytoene synthase family protein, at 533,489 to 534,343 _RS02455 LRK54_RS02460: LRK54_RS02460 - phosphoglycolate phosphatase, at 534,340 to 535,020 _RS02460 LRK54_RS02465: LRK54_RS02465 - bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG, at 535,017 to 535,721 _RS02465 LRK54_RS02470: LRK54_RS02470 - YciI family protein, at 535,814 to 536,068 _RS02470
Group Condition LRK54_RS02450 LRK54_RS02455 LRK54_RS02460 LRK54_RS02465 LRK54_RS02470
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors N.D. N.D. -1.8 N.D. -2.9
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM N.D. N.D. -2.1 N.D. -2.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM N.D. N.D. -2.1 N.D. -1.6
stress R2A with Nickel (II) chloride 0.3125 mM N.D. N.D. -3.1 N.D. -0.6
stress R2A with m-arsenite 0.078125 mM N.D. N.D. -3.1 N.D. +0.1
stress R2A with Magnesium sulfate 3.90625 mM N.D. N.D. -3.0 N.D. +0.0
stress R2A with Ferric chloride 1.5625 mM N.D. N.D. -3.0 N.D. +0.1
stress R2A with Chloride 250 mM N.D. N.D. -2.7 N.D. -0.2
stress R2A with lithium chloride 15.625 mM N.D. N.D. -2.8 N.D. +0.0
stress R2A with Zinc chloride 0.625 mM N.D. N.D. -2.5 N.D. -0.3
stress R2A with Cadmium chloride hemipentahydrate 0.0390625 mM N.D. N.D. -2.5 N.D. -0.3
stress R2A with Magnesium sulfate 3.90625 mM N.D. N.D. -2.7 N.D. -0.0
stress R2A with bismuth(III) chloride 0.03125 mM N.D. N.D. -2.6 N.D. -0.1
r2a_control R2A control N.D. N.D. -2.8 N.D. +0.2
carbon source Gly-Glu 20 mM N.D. N.D. -3.0 N.D. +0.4
stress R2A with Chloride 250 mM N.D. N.D. -2.7 N.D. +0.1
stress R2A with m-arsenite 0.078125 mM N.D. N.D. -2.7 N.D. +0.1
stress R2A with Chloride 250 mM N.D. N.D. -2.7 N.D. +0.2
stress R2A with Chloride 250 mM N.D. N.D. -2.8 N.D. +0.3
stress R2A with sodium bromide 250 mM N.D. N.D. -2.6 N.D. +0.2
stress R2A with Uranyl acetate 2.5 mM N.D. N.D. -2.5 N.D. +0.2
stress R2A with lithium chloride 15.625 mM N.D. N.D. -2.6 N.D. +0.3
stress R2A with nitrite 25 mM N.D. N.D. -2.5 N.D. +0.2
stress R2A with silver chloride 1 mM N.D. N.D. -2.5 N.D. +0.3
r2a_control R2A control N.D. N.D. -2.4 N.D. +0.3
stress R2A with nitrite 25 mM N.D. N.D. -2.5 N.D. +0.5
stress R2A with sulfate 250 mM N.D. N.D. -2.3 N.D. +0.5
stress R2A with bismuth(III) chloride 0.03125 mM N.D. N.D. -2.5 N.D. +1.0
stress R2A with Manganese (II) chloride tetrahydrate 2.5 mM N.D. N.D. +2.2 N.D. -0.5
stress R2A with Manganese (II) chloride tetrahydrate 2.5 mM N.D. N.D. +3.8 N.D. -0.9
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