Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS02215 and LRK54_RS02220 are separated by 176 nucleotidesLRK54_RS02220 and LRK54_RS02225 are separated by 279 nucleotidesLRK54_RS02225 and LRK54_RS02230 are separated by 172 nucleotidesLRK54_RS02230 and LRK54_RS02235 are separated by 122 nucleotides LRK54_RS02215: LRK54_RS02215 - GspH/FimT family pseudopilin, at 482,505 to 483,137 _RS02215 LRK54_RS02220: LRK54_RS02220 - GGDEF domain-containing protein, at 483,314 to 485,170 _RS02220 LRK54_RS02225: LRK54_RS02225 - tRNA-Thr, at 485,450 to 485,525 _RS02225 LRK54_RS02230: LRK54_RS02230 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, at 485,698 to 486,660 _RS02230 LRK54_RS02235: LRK54_RS02235 - signal peptidase II, at 486,783 to 487,283 _RS02235
Group Condition LRK54_RS02215 LRK54_RS02220 LRK54_RS02225 LRK54_RS02230 LRK54_RS02235
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.9 -0.4 N.D. N.D. N.D.
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.9 -0.2 N.D. N.D. N.D.
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +1.0 -0.3 N.D. N.D. N.D.
carbon source D-Raffinose 20 mM +0.9 -0.2 N.D. N.D. N.D.
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.9 -0.2 N.D. N.D. N.D.
stress R2A with Cesium chloride 3.90625 mM +1.0 -0.2 N.D. N.D. N.D.
carbon source casaminos 2 mg/mL +1.0 -0.1 N.D. N.D. N.D.
stress R2A with silver chloride 1 mM +1.1 -0.0 N.D. N.D. N.D.
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM +1.1 -0.1 N.D. N.D. N.D.
carbon source D-Glucose 20 mM +1.1 -0.0 N.D. N.D. N.D.
carbon source Gly-Glu 20 mM +1.2 -0.2 N.D. N.D. N.D.
carbon source casaminos 2 mg/mL +1.1 -0.0 N.D. N.D. N.D.
stress R2A with Uranyl acetate 2.5 mM +1.1 +0.0 N.D. N.D. N.D.
carbon source D-Glucose (C); 30C +1.1 +0.1 N.D. N.D. N.D.
stress R2A with beryllium sulfate tetrahydrate 1.953125 mM +1.1 -0.0 N.D. N.D. N.D.
pH R2A_PIPES pH 4 +1.0 +0.1 N.D. N.D. N.D.
carbon source Gly-Glu 20 mM +1.4 -0.2 N.D. N.D. N.D.
anaerobic Anaerobic, acetate donor; nitrate electron acceptor +1.3 -0.2 N.D. N.D. N.D.
stress R2A with bismuth(III) chloride 0.03125 mM +1.3 -0.1 N.D. N.D. N.D.
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM +1.0 +0.2 N.D. N.D. N.D.
carbon source D-Maltose 20 mM +1.3 -0.0 N.D. N.D. N.D.
pH R2A_PIPES pH 4 +1.2 +0.1 N.D. N.D. N.D.
stress R2A with Aluminum chloride 3.125 mM +1.2 +0.0 N.D. N.D. N.D.
carbon source acetate 20 mM +1.5 -0.2 N.D. N.D. N.D.
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors +1.7 -0.2 N.D. N.D. N.D.
stress R2A with Ferric chloride 1.5625 mM +1.4 +0.1 N.D. N.D. N.D.
carbon source D-Trehalose 20 mM +1.5 +0.0 N.D. N.D. N.D.
carbon source acetate 20 mM +1.8 -0.1 N.D. N.D. N.D.
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors +2.0 -0.2 N.D. N.D. N.D.
stress R2A with ammonium iron(II) sulfate 2.5 mM +1.9 +0.0 N.D. N.D. N.D.
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