Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS01685 and LRK54_RS01690 are separated by 71 nucleotidesLRK54_RS01690 and LRK54_RS01695 overlap by 4 nucleotidesLRK54_RS01695 and LRK54_RS01700 overlap by 4 nucleotidesLRK54_RS01700 and LRK54_RS01705 are separated by 104 nucleotides LRK54_RS01685: LRK54_RS01685 - tryptophan synthase subunit beta, at 358,866 to 360,077 _RS01685 LRK54_RS01690: LRK54_RS01690 - cupin-like domain-containing protein, at 360,149 to 361,162 _RS01690 LRK54_RS01695: LRK54_RS01695 - phosphoribosylanthranilate isomerase, at 361,159 to 361,782 _RS01695 LRK54_RS01700: LRK54_RS01700 - tRNA pseudouridine(38-40) synthase TruA, at 361,779 to 362,561 _RS01700 LRK54_RS01705: LRK54_RS01705 - fimbrial protein FimV, at 362,666 to 365,065 _RS01705
Group Condition LRK54_RS01685 LRK54_RS01690 LRK54_RS01695 LRK54_RS01700 LRK54_RS01705
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM -3.0 +0.0 N.D. -2.3 +0.4
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM -3.1 +0.1 N.D. -2.3 +0.4
stress R2A with Zinc chloride 0.625 mM -2.7 +0.1 N.D. -2.3 +0.3
carbon source Gly-Glu 20 mM -2.4 -0.1 N.D. -2.3 +0.5
carbon source Gly-Glu 20 mM -2.6 +0.0 N.D. -2.3 +0.6
stress R2A with Zinc chloride 0.625 mM -2.6 +0.1 N.D. -2.1 +0.3
stress R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM -3.1 +0.1 N.D. -1.3 +0.3
carbon source pyruvate 20 mM -3.0 -0.0 N.D. -0.9 +0.1
stress R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM -2.8 +0.1 N.D. -1.2 +0.2
stress R2A with Manganese (II) chloride tetrahydrate 3.125 mM -2.8 -0.1 N.D. -1.0 +0.2
stress R2A with Manganese (II) chloride tetrahydrate 3.125 mM -2.7 +0.0 N.D. -1.3 +0.3
carbon source D-Trehalose 20 mM -3.0 -0.0 N.D. -0.7 +0.2
r2a_control R2A control -2.9 +0.1 N.D. -0.8 +0.3
carbon source D-Glucose 20 mM -2.9 +0.1 N.D. -1.1 +0.6
stress R2A with Gallium(III)chloride 0.78125 mM -1.3 +0.2 N.D. -2.4 +0.4
pH R2A pH6 -2.9 +0.2 N.D. -0.6 +0.3
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM -1.7 +0.1 N.D. -1.9 +0.8
stress R2A with Aluminum chloride 3.125 mM -2.2 +0.0 N.D. -1.9 +1.3
carbon source NAG 20 mM -2.8 +0.1 N.D. -0.5 +0.5
stress R2A with Gallium(III)chloride 0.78125 mM -1.6 +0.1 N.D. -1.9 +0.7
carbon source D-Trehalose 20 mM -2.4 +0.0 N.D. -0.5 +1.2
stress R2A with m-arsenite 0.078125 mM -2.9 +0.1 N.D. +1.3 +0.9
stress R2A with m-arsenite 0.078125 mM -2.8 +0.2 N.D. +1.4 +0.7
stress R2A with ammonium iron(II) sulfate 2.5 mM -2.3 +0.2 N.D. +0.6 +1.0
stress R2A with Ferric chloride 1.5625 mM -2.2 +0.2 N.D. +0.6 +1.3
stress R2A with Cesium chloride 3.90625 mM -2.2 +0.3 N.D. +1.0 +0.9
stress R2A with lithium chloride 15.625 mM -1.5 +0.2 N.D. +1.8 +0.5
anaerobic Anaerobic, acetate donor; nitrate electron acceptor -1.2 +0.2 N.D. +1.5 +1.4
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors -1.2 +0.1 N.D. +1.7 +1.4
stress R2A with Nickel (II) chloride 0.3125 mM -1.4 +0.0 N.D. +3.0 +0.8
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