Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS01405 and LRK54_RS01410 are separated by 44 nucleotidesLRK54_RS01410 and LRK54_RS01415 are separated by 153 nucleotidesLRK54_RS01415 and LRK54_RS01420 are separated by 36 nucleotidesLRK54_RS01420 and LRK54_RS01425 are separated by 77 nucleotides LRK54_RS01405: LRK54_RS01405 - YdeI/OmpD-associated family protein, at 304,495 to 305,076 _RS01405 LRK54_RS01410: LRK54_RS01410 - ABC transporter ATP-binding protein/permease, at 305,121 to 306,965 _RS01410 LRK54_RS01415: LRK54_RS01415 - DUF3772 domain-containing protein, at 307,119 to 309,527 _RS01415 LRK54_RS01420: LRK54_RS01420 - helix-turn-helix domain-containing protein, at 309,564 to 310,379 _RS01420 LRK54_RS01425: LRK54_RS01425 - VOC family protein, at 310,457 to 310,879 _RS01425
Group Condition LRK54_RS01405 LRK54_RS01410 LRK54_RS01415 LRK54_RS01420 LRK54_RS01425
stress R2A with bismuth(III) chloride 0.03125 mM +1.0 -2.7 -3.0 -0.1 +0.3
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM -0.3 -1.5 -2.8 +0.1 +0.0
stress R2A with Aluminum chloride 3.125 mM -0.0 -1.1 -2.9 +0.0 -0.1
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM -0.1 -1.4 -2.7 +0.0 +0.2
stress R2A with Aluminum chloride 3.125 mM -0.2 -1.0 -2.7 +0.1 -0.0
stress R2A with Ferric chloride 1.5625 mM +0.1 -1.8 -1.9 +0.0 -0.0
stress R2A with m-arsenite 0.078125 mM -0.3 -3.6 +0.5 +0.1 +0.2
stress R2A with Aluminum chloride 3.125 mM -0.1 -1.4 -1.5 +0.2 -0.0
stress R2A with Nickel (II) chloride 0.3125 mM -0.2 -3.3 +0.3 +0.3 +0.1
stress R2A with nitrite 50 mM -0.4 -2.4 +0.1 -0.0 -0.0
stress R2A with silver chloride 1 mM -0.8 -2.2 +0.3 +0.0 -0.1
stress R2A with m-arsenite 0.078125 mM -0.2 -3.3 +0.4 +0.2 +0.2
stress R2A with Zinc chloride 0.625 mM -0.1 -1.9 -0.8 +0.3 -0.0
stress R2A with Manganese (II) chloride tetrahydrate 3.125 mM +0.3 -1.3 -1.4 +0.0 -0.1
stress R2A with Cesium chloride 3.90625 mM -0.4 -2.5 +0.6 +0.2 -0.1
stress R2A with Zinc chloride 0.625 mM -0.2 -2.0 -0.4 +0.1 +0.3
stress R2A with Aluminum chloride 3.125 mM +0.2 -1.1 -1.6 +0.2 +0.1
stress R2A with Nickel (II) chloride 0.3125 mM +0.8 -2.3 -0.6 +0.3 -0.2
stress R2A with nitrite 25 mM +0.3 -2.4 -0.0 -0.0 +0.0
stress R2A with Manganese (II) chloride tetrahydrate 3.125 mM +0.2 -1.3 -1.1 +0.2 +0.1
stress R2A with Cadmium chloride hemipentahydrate 0.0390625 mM +0.1 -2.4 +0.1 +0.2 +0.2
stress R2A with Chloride 250 mM -0.2 -1.9 +0.3 +0.2 -0.2
carbon source Gly-Glu 20 mM +0.4 -1.1 -1.2 +0.3 -0.1
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.6 -0.6 -1.0 -0.0 +0.5
stress R2A with nitrite 50 mM +0.1 -2.4 +0.3 +0.3 +0.1
stress R2A with silver chloride 1 mM -0.2 -2.3 +0.6 +0.1 +0.1
stress R2A with Cesium chloride 3.90625 mM -0.0 -2.6 +0.7 +0.3 +0.1
r2a_control R2A control -0.6 -1.5 +0.3 +0.1 +0.2
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors +0.5 -2.2 +0.6 +0.4 +0.2
anaerobic Anaerobic, acetate donor; nitrate electron acceptor +0.6 -1.6 +0.5 +0.1 -0.1
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