Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS01315 and LRK54_RS01320 are separated by 59 nucleotidesLRK54_RS01320 and LRK54_RS01325 are separated by 108 nucleotidesLRK54_RS01325 and LRK54_RS01330 are separated by 98 nucleotidesLRK54_RS01330 and LRK54_RS01335 are separated by 27 nucleotides LRK54_RS01315: LRK54_RS01315 - BON domain-containing protein, at 285,308 to 285,958 _RS01315 LRK54_RS01320: LRK54_RS01320 - zinc-dependent alcohol dehydrogenase family protein, at 286,018 to 287,001 _RS01320 LRK54_RS01325: LRK54_RS01325 - alpha/beta fold hydrolase, at 287,110 to 288,474 _RS01325 LRK54_RS01330: LRK54_RS01330 - erythromycin esterase family protein, at 288,573 to 289,904 _RS01330 LRK54_RS01335: LRK54_RS01335 - ferritin-like domain-containing protein, at 289,932 to 290,750 _RS01335
Group Condition LRK54_RS01315 LRK54_RS01320 LRK54_RS01325 LRK54_RS01330 LRK54_RS01335
biofilm assay; biofilm sample biofilm; Day2; NLDM; -1.0 -0.1 -0.0 -0.1 +0.3
phage 1B-T1 -0.4 -0.5 -0.2 -0.0 +0.2
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM -0.7 +0.1 -0.1 -0.0 -0.2
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM +0.1 -0.2 -0.5 -0.0 -0.2
phage S5-T2 -0.7 +0.2 -0.2 -0.0 -0.0
biofilm assay; planktonic sample planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.8 +0.0 +0.0 -0.1 +0.1
phage 1C-T1 +0.3 -0.4 -0.3 +0.0 -0.1
no phage control No phage control -0.2 +0.4 -0.4 -0.1 -0.1
stress R2A with chromate 0.0048828125 mM +0.4 +0.1 -0.7 +0.1 -0.3
stress R2A_PIPES with Nickel (II) chloride 424 uM -0.2 -0.1 +0.2 -0.4 +0.1
carbon source a-Cyclodextrin 20 mM +0.3 -0.5 -0.2 +0.2 -0.0
stress R2A with bismuth(III) chloride 0.03125 mM -0.6 -0.1 +0.2 +0.1 +0.2
stress R2A with Cobalt chloride 0.15625 mM -0.4 -0.1 -0.2 +0.1 +0.3
stress R2A with nitrite 25 mM -0.9 +0.5 +0.0 -0.0 +0.3
stress R2A with Nickel (II) chloride 0.3125 mM +0.6 +0.1 -0.5 -0.1 -0.1
stress R2A with Zinc chloride 0.625 mM +0.5 +0.1 -0.2 +0.1 -0.5
phage SA-T2 +0.4 -0.3 +0.2 +0.1 -0.3
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 -0.2 +0.5 -0.2 -0.0 +0.1
stress R2A with nitrate 250 mM -0.4 +0.3 +0.0 +0.0 +0.3
stress R2A with Selective_ion_mix_1 1 X +0.4 -0.4 +0.2 +0.1 +0.0
phage 4B-T2 -0.3 +0.6 +0.1 +0.1 -0.1
phage 1C-T2 +0.4 -0.4 +0.4 -0.1 +0.0
phage 2E-T1 +0.2 +0.5 -0.4 +0.1 +0.2
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM +0.7 +0.0 +0.1 -0.1 -0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.2 -0.1 +0.4 -0.0 +0.5
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors +0.5 -0.2 -0.1 +0.2 +0.1
phage 3E-T2 +0.3 +0.4 +0.3 -0.1 -0.2
phage 4B-T1 +0.7 +0.1 +0.4 -0.1 -0.1
stress R2A with Chloride 250 mM +0.4 +0.2 +0.2 +0.1 +0.1
phage 1E-T1 +0.4 +0.4 +0.1 +0.1 +0.3
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