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Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK54_RS01235 and LRK54_RS01240 are separated by 79 nucleotides
LRK54_RS01240 and LRK54_RS01245 are separated by 59 nucleotides
LRK54_RS01245 and LRK54_RS01250 are separated by 19 nucleotides
LRK54_RS01250 and LRK54_RS01255 are separated by 13 nucleotides
LRK54_RS01235: LRK54_RS01235 - Slp family lipoprotein, at 272,899 to 273,480
_RS01235
LRK54_RS01240: LRK54_RS01240 - IS4 family transposase, at 273,560 to 274,900
_RS01240
LRK54_RS01245: LRK54_RS01245 - histidine triad nucleotide-binding protein, at 274,960 to 275,304
_RS01245
LRK54_RS01250: LRK54_RS01250 - recombination mediator RecR, at 275,324 to 275,923
_RS01250
LRK54_RS01255: LRK54_RS01255 - YbaB/EbfC family nucleoid-associated protein, at 275,937 to 276,260
_RS01255
Group
Condition
LRK54
_RS01235
LRK54
_RS01240
LRK54
_RS01245
LRK54
_RS01250
LRK54
_RS01255
stress
R2A with bismuth(III) chloride 0.03125 mM
-2.7
N.D.
-0.5
-0.1
N.D.
stress
R2A with Calcium chloride 250 mM
-2.9
N.D.
-0.2
-0.2
N.D.
stress
R2A with silver chloride 1 mM
-1.7
N.D.
-0.5
-0.3
N.D.
stress
R2A with Cadmium chloride hemipentahydrate 0.0390625 mM
-1.9
N.D.
-0.2
-0.1
N.D.
stress
R2A with silver chloride 1 mM
-1.8
N.D.
+0.1
-0.3
N.D.
stress
R2A with Manganese (II) chloride tetrahydrate 6.25 mM
-1.7
N.D.
-0.1
-0.1
N.D.
stress
R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM
-1.2
N.D.
+0.0
-0.8
N.D.
stress
R2A with arsenate 31.25 mM
-1.4
N.D.
-0.2
-0.3
N.D.
stress
R2A with Manganese (II) chloride tetrahydrate 6.25 mM
-1.4
N.D.
+0.0
-0.4
N.D.
stress
R2A_PIPES with Cobalt chloride 256 uM
-1.6
N.D.
-0.1
-0.1
N.D.
stress
R2A with Strontium chloride 3.90625 mM
-1.0
N.D.
-0.0
-0.8
N.D.
stress
R2A with SpecU metal mix 1 X
-1.3
N.D.
-0.1
-0.3
N.D.
stress
R2A with Cadmium chloride hemipentahydrate 0.0390625 mM
-1.8
N.D.
+0.1
+0.0
N.D.
stress
R2A with Calcium chloride 250 mM
-1.5
N.D.
+0.1
-0.2
N.D.
stress
R2A with Calcium chloride 125 mM
-1.5
N.D.
-0.1
+0.1
N.D.
stress
R2A with selenate 31.25 mM
-0.8
N.D.
-0.2
-0.6
N.D.
stress
R2A with Calcium chloride 125 mM
-1.7
N.D.
-0.0
+0.2
N.D.
stress
R2A with arsenate 31.25 mM
-1.5
N.D.
-0.0
-0.0
N.D.
stress
R2A_PIPES with Cobalt chloride 256 uM
-1.7
N.D.
-0.0
+0.2
N.D.
pH
R2A_PIPES pH 4
-0.9
N.D.
-0.2
-0.3
N.D.
stress
R2A with SpecU metal mix 1 X
-1.2
N.D.
-0.1
-0.2
N.D.
stress
R2A with Manganese (II) chloride tetrahydrate 1.25 mM
-0.9
N.D.
-0.2
-0.3
N.D.
stress
R2A with nitrite 25 mM
-0.8
N.D.
-0.1
-0.6
N.D.
stress
R2A_PIPES with Cadmium chloride 16 uM
-1.0
N.D.
-0.4
+0.1
N.D.
stress
R2A with Chloride 250 mM
-1.1
N.D.
+0.1
-0.2
N.D.
stress
R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM
-0.9
N.D.
+0.2
-0.3
N.D.
stress
R2A with Aluminum chloride 3.125 mM
+0.9
N.D.
-0.3
-0.5
N.D.
carbon source
a-Cyclodextrin 20 mM
+1.4
N.D.
-0.2
-0.1
N.D.
stress
R2A with Aluminum chloride 3.125 mM
+2.1
N.D.
-0.3
-0.3
N.D.
carbon source
a-Cyclodextrin 20 mM
+1.4
N.D.
+0.0
+0.1
N.D.
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