Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 314 experiments or choose conditions or try the comparative fitness browser

500 ntLRK54_RS00430 and LRK54_RS00435 overlap by 4 nucleotidesLRK54_RS00435 and LRK54_RS00440 are separated by 10 nucleotidesLRK54_RS00440 and LRK54_RS00445 are separated by 145 nucleotidesLRK54_RS00445 and LRK54_RS00450 are separated by 195 nucleotides LRK54_RS00430: LRK54_RS00430 - NUDIX hydrolase, at 92,793 to 93,278 _RS00430 LRK54_RS00435: LRK54_RS00435 - tRNA 2-thiouridine(34) synthase MnmA, at 93,275 to 94,423 _RS00435 LRK54_RS00440: LRK54_RS00440 - high frequency lysogenization protein HflD, at 94,434 to 95,057 _RS00440 LRK54_RS00445: LRK54_RS00445 - porin, at 95,203 to 96,459 _RS00445 LRK54_RS00450: LRK54_RS00450 - ribonuclease T, at 96,655 to 97,323 _RS00450
Group Condition LRK54_RS00430 LRK54_RS00435 LRK54_RS00440 LRK54_RS00445 LRK54_RS00450
stress R2A with arsenate 31.25 mM -2.8 +0.0 -3.4 -0.2 -0.5
stress R2A with Aluminum chloride 1.5625 mM -2.9 -1.8 -2.3 -0.2 +0.4
stress R2A with nitrite 25 mM -0.4 -2.2 -3.3 -0.1 -0.5
r2a_control R2A control -2.1 -0.3 -3.5 -0.1 -0.3
stress R2A with Zinc chloride 0.625 mM -1.1 -0.8 -3.6 -0.1 -0.6
stress R2A with Aluminum chloride 3.125 mM -1.6 -0.5 -3.4 -0.1 -0.6
stress R2A with nitrite 50 mM -1.4 -1.1 -2.5 -0.1 -1.0
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM -1.1 -0.9 -3.2 -0.0 -0.7
r2a_control R2A control -1.5 -0.6 -3.5 -0.0 -0.3
stress R2A with Cadmium chloride hemipentahydrate 0.0390625 mM -0.8 -0.4 -3.6 -0.1 -0.9
r2a_control R2A control -1.4 -0.6 -3.3 -0.1 -0.5
stress R2A with nitrate 125 mM -0.9 -0.5 -3.5 -0.1 -0.8
biofilm assay; biofilm sample biofilm; Day2; NLDM; -2.9 +0.2 -2.7 +0.0 -0.2
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -2.8 -0.2 -2.2 -0.1 -0.3
stress R2A with Uranyl acetate 2.5 mM -0.8 -1.4 -3.3 -0.1 +0.1
stress R2A with nitrite 50 mM +0.3 -2.0 -3.2 -0.1 -0.5
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM -1.4 -0.7 -3.0 -0.0 +0.5
stress R2A with Nickel (II) chloride 0.3125 mM -0.7 +0.8 -3.9 -0.1 -0.5
stress R2A with beryllium sulfate tetrahydrate 1.953125 mM +0.7 -0.6 -3.0 -0.1 -1.4
stress R2A with Zinc chloride 0.625 mM +0.9 -0.9 -3.6 -0.1 -0.6
stress R2A with nitrite 25 mM +1.0 -2.1 -3.3 -0.0 +0.2
stress R2A with Cesium chloride 3.90625 mM +1.2 -0.8 -3.2 -0.2 -0.2
stress R2A with Nickel (II) chloride 0.3125 mM -1.8 +1.5 -1.8 +0.0 -0.7
stress R2A with Calcium chloride 125 mM +1.5 -0.4 -3.1 -0.3 -0.4
r2a_control R2A control +0.8 +0.5 -4.0 -0.1 +0.3
stress R2A with lithium chloride 15.625 mM +1.2 +0.6 -3.2 -0.0 -1.0
stress R2A with lithium chloride 15.625 mM +1.7 +0.6 -2.9 -0.1 -0.4
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +2.2 -0.1 -2.1 +0.3 -0.9
stress R2A with Selective_ion_mix_1 1 X -0.5 +0.2 +5.6 -0.1 +0.2
stress R2A with Selective_ion_mix_1 1 X +0.0 +0.3 +5.5 -0.2 +0.0
remove
LRK54_RS00430
plot
remove
LRK54_RS00435
plot
remove
LRK54_RS00440
remove
LRK54_RS00445
plot
remove
LRK54_RS00450
plot