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Cofit
Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK54_RS00360 and LRK54_RS00365 are separated by 83 nucleotides
LRK54_RS00365 and LRK54_RS00370 are separated by 129 nucleotides
LRK54_RS00370 and LRK54_RS00375 are separated by 66 nucleotides
LRK54_RS00375 and LRK54_RS00380 are separated by 72 nucleotides
LRK54_RS00360: LRK54_RS00360 - tRNA-Cys, at 80,902 to 80,975
_RS00360
LRK54_RS00365: LRK54_RS00365 - tRNA-Gly, at 81,059 to 81,134
_RS00365
LRK54_RS00370: LRK54_RS00370 - tRNA-Gly, at 81,264 to 81,339
_RS00370
LRK54_RS00375: LRK54_RS00375 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 81,406 to 82,008
_RS00375
LRK54_RS00380: LRK54_RS00380 - excinuclease ABC subunit UvrC, at 82,081 to 83,907
_RS00380
Group
Condition
LRK54
_RS00360
LRK54
_RS00365
LRK54
_RS00370
LRK54
_RS00375
LRK54
_RS00380
phage
2B-T1
N.D.
N.D.
N.D.
N.D.
-0.4
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
N.D.
N.D.
-0.4
phage
1A-T1
N.D.
N.D.
N.D.
N.D.
-0.4
carbon source
D-Glucose-6-Phosphate 20 mM
N.D.
N.D.
N.D.
N.D.
-0.4
pH
R2A_PIPES pH 4.25
N.D.
N.D.
N.D.
N.D.
-0.4
phage
2F-T2
N.D.
N.D.
N.D.
N.D.
-0.4
stress
R2A with Manganese (II) chloride tetrahydrate 6.25 mM
N.D.
N.D.
N.D.
N.D.
-0.3
phage
2F-T1
N.D.
N.D.
N.D.
N.D.
-0.3
phage
S5-T1
N.D.
N.D.
N.D.
N.D.
-0.3
phage
2B-T2
N.D.
N.D.
N.D.
N.D.
-0.3
stress
R2A with mercury (II) chloride 0.009765625 mM
N.D.
N.D.
N.D.
N.D.
+0.3
stress
R2A with Cobalt chloride 0.15625 mM
N.D.
N.D.
N.D.
N.D.
+0.4
stress
R2A with bismuth(III) chloride 0.03125 mM
N.D.
N.D.
N.D.
N.D.
+0.4
stress
R2A with Ferric chloride 1.5625 mM
N.D.
N.D.
N.D.
N.D.
+0.4
stress
R2A with lead(II) chloride 0.625 mM
N.D.
N.D.
N.D.
N.D.
+0.4
stress
R2A with Chloride 250 mM
N.D.
N.D.
N.D.
N.D.
+0.4
stress
R2A with lead(II) chloride 0.625 mM
N.D.
N.D.
N.D.
N.D.
+0.4
stress
R2A with Selective_ion_mix_1 1 X
N.D.
N.D.
N.D.
N.D.
+0.4
stress
R2A with sodium bromide 250 mM
N.D.
N.D.
N.D.
N.D.
+0.4
stress
R2A with sodium bromide 250 mM
N.D.
N.D.
N.D.
N.D.
+0.5
stress
R2A with Chloride 250 mM
N.D.
N.D.
N.D.
N.D.
+0.5
stress
R2A with Chloride 250 mM
N.D.
N.D.
N.D.
N.D.
+0.5
stress
R2A with Chloride 250 mM
N.D.
N.D.
N.D.
N.D.
+0.5
stress
R2A with lithium chloride 15.625 mM
N.D.
N.D.
N.D.
N.D.
+0.6
stress
R2A with lithium chloride 15.625 mM
N.D.
N.D.
N.D.
N.D.
+0.7
stress
R2A with Cesium chloride 3.90625 mM
N.D.
N.D.
N.D.
N.D.
+0.7
stress
R2A with Magnesium sulfate 3.90625 mM
N.D.
N.D.
N.D.
N.D.
+0.7
stress
R2A with Cesium chloride 3.90625 mM
N.D.
N.D.
N.D.
N.D.
+0.8
stress
R2A with bismuth(III) chloride 0.03125 mM
N.D.
N.D.
N.D.
N.D.
+0.8
stress
R2A with Magnesium sulfate 3.90625 mM
N.D.
N.D.
N.D.
N.D.
+0.8
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