Fitness for 5 genes in Erwinia tracheiphila HP pepo 2.2

Add gene:

Number of genes on each side:  

Top 22 experiments (either direction), sorted by average fitness

Or view all 22 experiments or choose conditions or try the comparative fitness browser

500 ntarnA and arnC overlap by 1 nucleotidesarnC and arnB overlap by 11 nucleotidesarnB and IJEDHG_02610 are separated by 600 nucleotidesIJEDHG_02610 and IJEDHG_02615 are separated by 177 nucleotides IJEDHG_02595: arnA - bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA, at 357,209 to 359,191 arnA IJEDHG_02600: arnC - undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase, at 359,191 to 360,171 arnC IJEDHG_02605: arnB - UDP-4-amino-4-deoxy-L-arabinose aminotransferase, at 360,161 to 361,312 arnB IJEDHG_02610: IJEDHG_02610 - hypothetical protein, at 361,913 to 362,050 _02610 IJEDHG_02615: IJEDHG_02615 - ABC-type xenobiotic transporter, at 362,228 to 364,351 _02615
Group Condition IJEDHG_02595 IJEDHG_02600 IJEDHG_02605 IJEDHG_02610 IJEDHG_02615
arnA arnC arnB
survival survival 4C, 24 hrs -3.8 -2.8 -4.0 N.D. +0.2
survival survival 4C, 24 hrs -4.1 -2.4 -3.5 N.D. +0.3
cucxylem CucXylem -1.8 -1.6 -1.8 N.D. -0.1
cucxylem CucXylem -2.0 -1.6 -1.4 N.D. -0.1
cucxylem CucXylem -1.3 -1.4 -1.0 N.D. +0.1
cucxylem CucXylem -1.5 -1.3 -0.9 N.D. +0.0
hbm-glucose HBM-Glucose -1.4 -0.8 -1.3 N.D. +0.2
hbm-glucose HBM-Glucose -0.8 -1.1 -1.1 N.D. +0.1
in planta plant=Melon; plant sample=MP3; plant location=NA -1.0 -0.5 -0.2 N.D. -0.4
in planta plant=Melon; plant sample=MP2; plant location=NA -0.5 -0.3 -1.1 N.D. +0.0
hbm-cucxylem HBM-CucXylem -0.7 -0.4 -0.7 N.D. -0.0
hbm-sucrose HBM-Sucrose -0.8 -0.5 -0.6 N.D. +0.1
in planta plant=Cucumber; plant sample=CP2; plant location=NA -0.7 -0.5 -0.7 N.D. +0.0
in planta plant=Squash; plant sample=QP2; plant location=NA -0.6 -0.4 -0.6 N.D. -0.1
in planta plant=Melon; plant sample=MP1; plant location=NA -0.7 -0.5 -0.2 N.D. -0.1
mjm9 MJM9 -0.5 -0.3 -0.5 N.D. +0.1
hbm-cucxylem HBM-CucXylem -0.4 -0.3 -0.4 N.D. -0.0
hbm-sucrose HBM-Sucrose -0.5 -0.4 -0.3 N.D. +0.1
mjm9 MJM9 -0.5 -0.4 +0.1 N.D. +0.1
rich media rich media -0.4 -0.0 -0.3 N.D. +0.3
rich media rich media -0.0 +0.0 -0.2 N.D. -0.0
in planta plant=Squash; plant sample=QP3; plant location=NA +0.0 -0.4 +0.5 N.D. -0.1
remove
IJEDHG_02595
plot		 remove
IJEDHG_02600
plot		 remove
IJEDHG_02605		 remove
IJEDHG_02610
plot		 remove
IJEDHG_02615
plot