Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_21840 and IAI47_21845 are separated by 22 nucleotidesIAI47_21845 and IAI47_21850 are separated by 33 nucleotidesIAI47_21850 and IAI47_21855 are separated by 29 nucleotidesIAI47_21855 and IAI47_21860 overlap by 1 nucleotides IAI47_21840: IAI47_21840 - chorismate mutase, at 118,348 to 118,893 _21840 IAI47_21845: IAI47_21845 - cytochrome P450, at 118,916 to 120,106 _21845 IAI47_21850: IAI47_21850 - LacI family DNA-binding transcriptional regulator, at 120,140 to 121,144 _21850 IAI47_21855: IAI47_21855 - sucrose-6-phosphate hydrolase, at 121,174 to 122,583 _21855 IAI47_21860: IAI47_21860 - PTS sucrose transporter subunit IIBC, at 122,583 to 123,953 _21860
Group Condition IAI47_21840 IAI47_21845 IAI47_21850 IAI47_21855 IAI47_21860
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.2 -3.3 -0.1 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.4 -1.9 -0.1 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.2 -1.5 -0.0 -0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.2 -0.7 -0.1 +0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.2 -0.4 +0.2 -0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.2 -0.8 +0.0 -0.1
carbon source Ying_AminoAcid20 rep A; time point 3 +0.2 -0.1 -0.8 -0.1 +0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.1 -0.5 +0.2 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.1 -0.8 -0.1 +0.0
nitrogen source nitrogen source nitrate 5mM -0.4 +0.1 -0.4 +0.1 -0.0
no stress control Defined media control, aerobic +0.2 -0.4 -0.2 +0.1 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.1 -0.7 +0.2 -0.2
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.4 -0.4 +0.1 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.2 -0.7 +0.1 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.1 -0.4 +0.2 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 +0.2 +0.1 -0.7 +0.1 +0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.1 -0.5 +0.1 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.1 -0.6 +0.1 +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.1 +0.2 +0.3 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.3 +0.5 +0.2 -0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.4 -0.1 +0.3 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.1 +0.5 +0.2 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.2 +0.1 -0.4 +0.2 +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.0 +1.0 +0.0 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 -0.2 +0.5 +0.3 +0.2
no stress control Defined media control, anaerobic +0.5 +0.1 -0.2 +0.2 +0.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.2 +0.9 +0.0 -0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.2 +1.0 +0.3 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 -0.2 +0.3 +0.4 +0.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.1 +1.2 +0.1 +0.1
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IAI47_21840
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IAI47_21845
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IAI47_21855
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IAI47_21860
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