Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_21470 and IAI47_21475 are separated by 11 nucleotidesIAI47_21475 and IAI47_21480 are separated by 459 nucleotidesIAI47_21480 and IAI47_21485 are separated by 90 nucleotidesIAI47_21485 and IAI47_21490 are separated by 79 nucleotides IAI47_21470: IAI47_21470 - DUF2778 domain-containing protein, at 34,616 to 34,945 _21470 IAI47_21475: IAI47_21475 - type VI secretion system tube protein Hcp, at 34,957 to 35,448 _21475 IAI47_21480: IAI47_21480 - MBL fold metallo-hydrolase, at 35,908 to 36,687 _21480 IAI47_21485: IAI47_21485 - helix-turn-helix domain-containing protein, at 36,778 to 37,782 _21485 IAI47_21490: IAI47_21490 - H-NS histone family protein, at 37,862 to 38,263 _21490
Group Condition IAI47_21470 IAI47_21475 IAI47_21480 IAI47_21485 IAI47_21490
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 -0.4 -0.6 -0.4 -0.0 -0.9
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 -0.7 -0.2 -0.4 -0.1 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.8 -0.8 -0.5 +0.0 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 -0.3 -0.8 -0.3 +0.0 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.8 -0.5 -0.4 +0.1 -0.2
stress dichromate 2 uM, anaerobic -1.0 -0.5 -0.1 -0.1 -0.0
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.1 -0.2 -0.3 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 -0.4 -0.3 -0.2 -0.2 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.4 -0.3 -0.2 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.8 -0.4 -0.1 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.3 -0.2 -0.2 -0.3 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 -0.4 -0.3 -0.1 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50 -0.4 +0.1 -0.3 -0.1 -0.7
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 -0.2 -0.4 -0.1 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 -0.5 +0.3 -0.3 +0.1 -0.8
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.1 +0.0 -0.2 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.4 -0.4 +0.0 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 -0.1 -0.2 -0.3 +0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 -0.2 -0.0 -0.1 -0.6
nitrogen source nitrogen source nitrite 1mM +0.2 -0.5 -0.2 -0.1 +0.3
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.1 +0.3 +0.2 -0.7
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 -0.0 -0.0 +0.2 -0.6
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.7 +0.2 -0.0 +0.1 -0.6
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic +0.2 -0.6 +0.1 +0.0 +0.6
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 -0.2 -0.1 +0.3 +0.5
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.6 +0.2 -0.2 +0.1 +0.2
no stress control Defined media control, anaerobic +0.5 +0.4 -0.1 +0.0 +0.4
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic +0.3 +0.4 +0.1 -0.1 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.2 +0.4 -0.1 +0.7
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic +0.6 +0.5 +0.0 -0.0 +0.3
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