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Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
IAI47_21470 and IAI47_21475 are separated by 11 nucleotides
IAI47_21475 and IAI47_21480 are separated by 459 nucleotides
IAI47_21480 and IAI47_21485 are separated by 90 nucleotides
IAI47_21485 and IAI47_21490 are separated by 79 nucleotides
IAI47_21470: IAI47_21470 - DUF2778 domain-containing protein, at 34,616 to 34,945
_21470
IAI47_21475: IAI47_21475 - type VI secretion system tube protein Hcp, at 34,957 to 35,448
_21475
IAI47_21480: IAI47_21480 - MBL fold metallo-hydrolase, at 35,908 to 36,687
_21480
IAI47_21485: IAI47_21485 - helix-turn-helix domain-containing protein, at 36,778 to 37,782
_21485
IAI47_21490: IAI47_21490 - H-NS histone family protein, at 37,862 to 38,263
_21490
Group
Condition
IAI47
_21470
IAI47
_21475
IAI47
_21480
IAI47
_21485
IAI47
_21490
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50
-0.4
-0.6
-0.4
-0.0
-0.9
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50
-0.7
-0.2
-0.4
-0.1
-0.3
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.8
-0.8
-0.5
+0.0
+0.3
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50
-0.3
-0.8
-0.3
+0.0
-0.4
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.8
-0.5
-0.4
+0.1
-0.2
stress
dichromate 2 uM, anaerobic
-1.0
-0.5
-0.1
-0.1
-0.0
survival
Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.4
-0.1
-0.2
-0.3
-0.6
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50
-0.4
-0.3
-0.2
-0.2
-0.3
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.2
-0.4
-0.3
-0.2
-0.4
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.3
-0.8
-0.4
-0.1
+0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
-0.3
-0.2
-0.2
-0.3
-0.5
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.4
-0.4
-0.3
-0.1
-0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50
-0.4
+0.1
-0.3
-0.1
-0.7
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.4
-0.2
-0.4
-0.1
-0.3
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50
-0.5
+0.3
-0.3
+0.1
-0.8
survival
Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.4
+0.1
+0.0
-0.2
-0.6
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.5
-0.4
-0.4
+0.0
+0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.5
-0.1
-0.2
-0.3
+0.3
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.5
-0.2
-0.0
-0.1
-0.6
nitrogen source
nitrogen source nitrite 1mM
+0.2
-0.5
-0.2
-0.1
+0.3
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
-0.1
+0.3
+0.2
-0.7
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.5
-0.0
-0.0
+0.2
-0.6
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.7
+0.2
-0.0
+0.1
-0.6
stress
Manganese (II) chloride tetrahydrate 50 uM, anaerobic
+0.2
-0.6
+0.1
+0.0
+0.6
survival
Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.4
-0.2
-0.1
+0.3
+0.5
survival
Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.6
+0.2
-0.2
+0.1
+0.2
no stress control
Defined media control, anaerobic
+0.5
+0.4
-0.1
+0.0
+0.4
stress
Manganese (II) chloride tetrahydrate 50 uM, aerobic
+0.3
+0.4
+0.1
-0.1
+0.5
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
+0.2
+0.4
-0.1
+0.7
stress
Manganese (II) chloride tetrahydrate 50 uM, aerobic
+0.6
+0.5
+0.0
-0.0
+0.3
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