Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_21260 and IAI47_21265 are separated by 112 nucleotidesIAI47_21265 and IAI47_21270 overlap by 4 nucleotidesIAI47_21270 and IAI47_21275 are separated by 9 nucleotidesIAI47_21275 and IAI47_21280 are separated by 6 nucleotides IAI47_21260: IAI47_21260 - glutathione S-transferase, at 508,902 to 509,564 _21260 IAI47_21265: IAI47_21265 - ATP-binding cassette domain-containing protein, at 509,677 to 510,480 _21265 IAI47_21270: IAI47_21270 - ABC transporter permease subunit, at 510,477 to 511,163 _21270 IAI47_21275: IAI47_21275 - ABC transporter permease subunit, at 511,173 to 511,898 _21275 IAI47_21280: IAI47_21280 - amino acid ABC transporter substrate-binding protein, at 511,905 to 512,753 _21280
Group Condition IAI47_21260 IAI47_21265 IAI47_21270 IAI47_21275 IAI47_21280
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.4 -0.4 -0.4 -1.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.1 -0.8 -0.2 -0.3
carbon source Ying_sugar7 rep C; time point 2 +0.1 -0.3 -0.2 -0.8 -0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.0 -0.7 -0.4 -0.2
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.2 -0.6 -0.4 -0.5
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -0.2 -0.1 -0.4 -0.7
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.4 +0.1 -0.5 -0.4
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.3 -0.4 -0.4 -0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 -0.5 -0.5 +0.1 -0.3
stress Cadmium acetate 8 uM, aerobic -0.3 -0.1 +0.1 +0.1 -0.7
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 +0.0 +0.2 -0.2 -0.6
stress Uranyl Acetate Dihydrate 200 uM, aerobic +0.2 -0.2 -0.1 -0.3 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.3 -0.4 -0.4 -0.3
stress copper (II) chloride 2 uM, anaerobic -0.2 -0.2 +0.4 +0.1 -0.8
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.4 -0.3 -0.2 -0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.3 -0.1 -1.1 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 +0.5 -0.3 +0.1 -0.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.4 -0.4 +0.0 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 -0.2 +0.4 -0.0 -0.6 +0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 +0.6 -0.4 +0.1 -0.1
nitrogen source Ammonium chloride (N) -0.4 +0.1 +0.3 -0.5 +0.5
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.5 +0.3 -0.2 +0.5
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.3 +0.1 +0.4 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.3 +0.1 -0.5 +0.1
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic +0.1 +0.1 +0.3 +0.4 -0.4
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.1 +0.3 +0.5 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50 -0.2 +0.5 +0.3 -0.0 +0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.1 +0.3 +0.6 -0.3
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.5 +0.3 +0.3 -0.2
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 +0.1 +0.1 +0.5 -0.3
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