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Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
IAI47_21260 and IAI47_21265 are separated by 112 nucleotides
IAI47_21265 and IAI47_21270 overlap by 4 nucleotides
IAI47_21270 and IAI47_21275 are separated by 9 nucleotides
IAI47_21275 and IAI47_21280 are separated by 6 nucleotides
IAI47_21260: IAI47_21260 - glutathione S-transferase, at 508,902 to 509,564
_21260
IAI47_21265: IAI47_21265 - ATP-binding cassette domain-containing protein, at 509,677 to 510,480
_21265
IAI47_21270: IAI47_21270 - ABC transporter permease subunit, at 510,477 to 511,163
_21270
IAI47_21275: IAI47_21275 - ABC transporter permease subunit, at 511,173 to 511,898
_21275
IAI47_21280: IAI47_21280 - amino acid ABC transporter substrate-binding protein, at 511,905 to 512,753
_21280
Group
Condition
IAI47
_21260
IAI47
_21265
IAI47
_21270
IAI47
_21275
IAI47
_21280
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
-0.4
-0.4
-0.4
-1.2
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.2
+0.1
-0.8
-0.2
-0.3
carbon source
Ying_sugar7 rep C; time point 2
+0.1
-0.3
-0.2
-0.8
-0.2
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.1
-0.0
-0.7
-0.4
-0.2
survival
Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
+0.2
-0.6
-0.4
-0.5
survival
Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.0
-0.2
-0.1
-0.4
-0.7
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
-0.4
+0.1
-0.5
-0.4
survival
Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.2
+0.3
-0.4
-0.4
-0.3
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.3
-0.5
-0.5
+0.1
-0.3
stress
Cadmium acetate 8 uM, aerobic
-0.3
-0.1
+0.1
+0.1
-0.7
survival
Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.3
+0.0
+0.2
-0.2
-0.6
stress
Uranyl Acetate Dihydrate 200 uM, aerobic
+0.2
-0.2
-0.1
-0.3
-0.5
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.0
+0.3
-0.4
-0.4
-0.3
stress
copper (II) chloride 2 uM, anaerobic
-0.2
-0.2
+0.4
+0.1
-0.8
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.2
+0.4
-0.3
-0.2
-0.3
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.3
+0.3
-0.1
-1.1
+0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.3
+0.5
-0.3
+0.1
-0.3
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.4
+0.4
-0.4
+0.0
+0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50
-0.2
+0.4
-0.0
-0.6
+0.1
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.3
+0.6
-0.4
+0.1
-0.1
nitrogen source
Ammonium chloride (N)
-0.4
+0.1
+0.3
-0.5
+0.5
survival
Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.1
-0.5
+0.3
-0.2
+0.5
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.2
+0.3
+0.1
+0.4
-0.3
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.3
+0.3
+0.1
-0.5
+0.1
stress
Manganese (II) chloride tetrahydrate 50 uM, anaerobic
+0.1
+0.1
+0.3
+0.4
-0.4
survival
Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.0
+0.1
+0.3
+0.5
-0.3
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50
-0.2
+0.5
+0.3
-0.0
+0.2
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.3
-0.1
+0.3
+0.6
-0.3
survival
Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.1
+0.5
+0.3
+0.3
-0.2
survival
Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.4
+0.1
+0.1
+0.5
-0.3
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