Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_21175 and IAI47_21180 are separated by 228 nucleotidesIAI47_21180 and IAI47_21185 are separated by 44 nucleotidesIAI47_21185 and IAI47_21190 are separated by 375 nucleotidesIAI47_21190 and IAI47_21195 are separated by 324 nucleotides IAI47_21175: IAI47_21175 - beta-galactosidase, at 486,033 to 488,063 _21175 IAI47_21180: IAI47_21180 - IS6 family transposase, at 488,292 to 488,986 _21180 IAI47_21185: IAI47_21185 - PAS domain-containing protein, at 489,031 to 490,194 _21185 IAI47_21190: IAI47_21190 - glutathione-independent formaldehyde dehydrogenase, at 490,570 to 491,703 _21190 IAI47_21195: IAI47_21195 - kdo(2)-lipid A phosphoethanolamine 7''-transferase, at 492,028 to 493,686 _21195
Group Condition IAI47_21175 IAI47_21180 IAI47_21185 IAI47_21190 IAI47_21195
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -2.4 +0.1 +0.5 -0.1
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.8 -0.3 -0.2 -0.0
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -1.1 +0.0 +0.0 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.5 -0.2 +0.1 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -1.1 +0.2 -0.0 +0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.6 -0.4 +0.1 +0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.6 +0.1 +0.3 -0.2
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -1.1 +0.4 +0.2 -0.0
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 -0.8 -0.1 +0.3 +0.1
no stress control Defined media control, aerobic -0.3 +0.5 -0.3 -0.1 -0.2
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -1.0 -0.0 +0.4 +0.0
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -0.9 +0.0 +0.3 +0.1
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 -0.9 +0.3 +0.3 -0.0
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.8 +0.3 +0.2 -0.1
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.7 +0.2 +0.1 +0.1
stress copper (II) chloride 2 uM, anaerobic -0.3 +0.5 -0.1 -0.2 +0.0
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.5 +0.4 -0.1 -0.0
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.5 +0.2 +0.3 -0.1
carbon source Ying_sugar7 rep A; time point 3 -0.0 +0.9 -0.2 -0.1 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.6 +0.3 +0.3 -0.1
stress copper (II) chloride 2 uM, anaerobic +0.2 +0.6 -0.0 +0.2 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.8 -0.2 +0.3 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.4 +0.2 +0.4 -0.1
stress Uranyl Acetate Dihydrate 200 uM, aerobic -0.1 +0.8 +0.2 +0.1 +0.0
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.6 +0.3 +0.1 +0.1
carbon source Ying_all64 rep C; time point 3 +0.0 +1.0 +0.1 +0.0 +0.0
carbon source Ying_OrganicAcid7 rep A; time point 3 +0.1 +1.0 +0.1 -0.0 -0.0
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.6 +0.1 +0.2 +0.2
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.7 +0.0 +0.2 +0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.8 +0.1 +0.3 +0.1
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IAI47_21175
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IAI47_21180
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IAI47_21190
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IAI47_21195
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