Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_21020 and IAI47_21025 are separated by 295 nucleotidesIAI47_21025 and IAI47_21030 are separated by 491 nucleotidesIAI47_21030 and IAI47_21035 are separated by 248 nucleotidesIAI47_21035 and IAI47_21040 are separated by 464 nucleotides IAI47_21020: IAI47_21020 - DUF1203 domain-containing protein, at 449,337 to 449,804 _21020 IAI47_21025: IAI47_21025 - glutathione S-transferase family protein, at 450,100 to 450,696 _21025 IAI47_21030: IAI47_21030 - glutathione S-transferase N-terminal domain-containing protein, at 451,188 to 451,889 _21030 IAI47_21035: IAI47_21035 - TetR/AcrR family transcriptional regulator, at 452,138 to 452,701 _21035 IAI47_21040: IAI47_21040 - LysR family transcriptional regulator, at 453,166 to 454,044 _21040
Group Condition IAI47_21020 IAI47_21025 IAI47_21030 IAI47_21035 IAI47_21040
nitrogen source nitrogen source Ammonium chloride 20mM +0.1 -0.2 +0.0 -1.8 -0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.1 +0.2 -2.2 +0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.1 -0.1 -1.5 -0.1
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.0 +0.2 -1.9 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -0.4 +0.3 -1.4 -0.3
no stress control Defined media control, aerobic +0.0 +0.1 +0.1 -1.9 -0.1
stress copper (II) chloride 5 uM, aerobic +0.1 -0.0 -0.1 -1.8 +0.1
stress Uranyl Acetate Dihydrate 200 uM, aerobic +0.1 +0.0 +0.2 -1.9 +0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -0.3 -0.7 +1.0 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.3 +0.1 -0.3 +1.7 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 -0.2 +0.1 -0.1 +1.8 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.4 -0.3 +1.7 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 -0.1 -0.0 +0.0 +1.9 -0.0
stress copper (II) chloride 2 uM, anaerobic +0.1 +0.0 -0.2 +1.8 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 +0.2 +0.1 +1.5 +0.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 +0.3 -0.0 +1.9 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 -0.2 +0.1 +0.1 +2.1 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.4 -0.1 +1.9 +0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.2 +0.1 +1.9 +0.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.1 -0.3 +2.6 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.1 +0.0 -0.3 +2.6 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 -0.0 +0.3 +0.3 +1.6 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.2 +0.2 +1.9 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.7 +0.5 -0.0 +2.6 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.1 +0.0 +2.2 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 +0.5 +0.3 +2.1 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 +0.3 +0.1 +2.7 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 +0.5 +0.3 +2.0 -0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.2 +0.3 +2.5 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 +0.7 +0.5 +2.6 -0.0
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IAI47_21020
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IAI47_21025
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IAI47_21035
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IAI47_21040
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