Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_21010 and IAI47_21015 are separated by 52 nucleotidesIAI47_21015 and IAI47_21020 are separated by 313 nucleotidesIAI47_21020 and IAI47_21025 are separated by 295 nucleotidesIAI47_21025 and IAI47_21030 are separated by 491 nucleotides IAI47_21010: IAI47_21010 - threonine/serine dehydratase, at 447,640 to 448,632 _21010 IAI47_21015: IAI47_21015 - helix-turn-helix transcriptional regulator, at 448,685 to 449,023 _21015 IAI47_21020: IAI47_21020 - DUF1203 domain-containing protein, at 449,337 to 449,804 _21020 IAI47_21025: IAI47_21025 - glutathione S-transferase family protein, at 450,100 to 450,696 _21025 IAI47_21030: IAI47_21030 - glutathione S-transferase N-terminal domain-containing protein, at 451,188 to 451,889 _21030
Group Condition IAI47_21010 IAI47_21015 IAI47_21020 IAI47_21025 IAI47_21030
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -0.9 +0.0 -0.3 -0.7
no stress control Defined media control, anaerobic -0.1 -1.7 -0.0 -0.0 +0.1
stress Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic -0.3 -0.9 -0.2 -0.3 +0.0
no stress control Defined media control, aerobic -0.2 -1.1 -0.1 -0.2 -0.1
stress Uranyl Acetate Dihydrate 200 uM, anaerobic -0.1 -1.5 -0.1 +0.1 +0.1
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -1.5 +0.2 +0.1 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.8 +0.0 +0.1 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.8 -0.5 +0.1 +0.1
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic -0.2 -1.0 -0.1 -0.0 +0.1
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -1.0 -0.2 +0.0 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -1.0 -0.3 +0.2 -0.1
stress Uranyl Acetate Dihydrate 200 uM, anaerobic -0.5 -0.8 +0.1 -0.1 +0.2
stress Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic -0.1 -0.7 -0.3 +0.0 +0.2
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.6 -0.2 +0.3 -0.2
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.6 -1.4 -0.1 +0.3 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 -0.0 -0.7 +0.5 -0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -1.1 +0.2 +0.1 +0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 +0.9 -0.1 -0.1 -0.6
no stress control Defined media control, aerobic -0.3 -0.6 +0.2 +0.2 +0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.4 -0.3 -0.4 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.5 -0.2 +0.4 -0.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.6 -0.3 -0.3 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.6 -0.4 +0.2 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.5 +0.0 -0.4 +0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.7 -0.3 -0.0 +0.2 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.6 -0.4 +0.5 +0.3
carbon source Ying_sugar7 rep C; time point 3 -0.0 +1.0 +0.0 -0.2 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.3 -0.3 +0.7 +0.5
carbon source Ying_all64 rep B; time point 3 +0.1 +1.0 +0.1 -0.2 +0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +1.5 -0.1 +0.4 +0.3
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