Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_20920 and IAI47_20925 are separated by 10 nucleotidesIAI47_20925 and IAI47_20930 are separated by 41 nucleotidesIAI47_20930 and IAI47_20935 are separated by 325 nucleotidesIAI47_20935 and IAI47_20940 are separated by 149 nucleotides IAI47_20920: IAI47_20920 - sugar ABC transporter permease, at 431,161 to 432,012 _20920 IAI47_20925: IAI47_20925 - sugar ABC transporter permease, at 432,023 to 433,330 _20925 IAI47_20930: IAI47_20930 - extracellular solute-binding protein, at 433,372 to 434,592 _20930 IAI47_20935: IAI47_20935 - ABC transporter ATP-binding protein, at 434,918 to 436,036 _20935 IAI47_20940: IAI47_20940 - hypothetical protein, at 436,186 to 436,743 _20940
Group Condition IAI47_20920 IAI47_20925 IAI47_20930 IAI47_20935 IAI47_20940
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.4 -0.5 -0.2 -0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.1 +0.0 -0.4 -0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.3 -0.3 -0.1 -0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.5 -0.1 -0.2 -0.3
nitrogen source Ammonium chloride (N) -0.4 +0.3 -0.2 -0.3 -0.3
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.1 -0.3 +0.0 -0.6
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.3 -0.0 -0.5 +0.1
no stress control Defined media control, aerobic +0.0 +0.2 -0.3 -0.3 -0.4
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.2 +0.1 +0.1 -0.5
stress copper (II) chloride 2 uM, anaerobic +0.1 -0.5 -0.4 +0.3 -0.1
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 -0.1 -0.3 -0.2 -0.2
stress copper (II) chloride 2 uM, anaerobic +0.3 -0.4 -0.1 +0.3 -0.5
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.0 -0.4 +0.4 -0.3
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.5 -0.3 +0.1 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.2 -0.2 +0.3 -0.4
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 -0.4 -0.4 +0.2 -0.0
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 +0.2 -0.7 +0.2 +0.1
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.3 +0.0 -0.3 +0.5
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.2 +0.4 -0.1 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.2 +0.4 -0.4 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.2 -0.4 +0.2 +0.1 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 +0.1 -0.3 +0.2 +0.2 +0.5
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.3 +0.1 +0.4 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.2 +0.4 -0.2 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.2 +0.3 +0.0 +0.4
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 -0.3 +0.1 +0.3 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.2 +0.3 +0.1 +0.5
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.2 -0.4 -0.0 +0.6
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 -0.0 +0.2 +0.2 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.3 +0.3 -0.1 +0.9
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IAI47_20920
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IAI47_20925
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IAI47_20935
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IAI47_20940
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