Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_20790 and IAI47_20795 are separated by 371 nucleotidesIAI47_20795 and IAI47_20800 are separated by 643 nucleotidesIAI47_20800 and IAI47_20805 are separated by 31 nucleotidesIAI47_20805 and IAI47_20810 are separated by 15 nucleotides IAI47_20790: IAI47_20790 - dienelactone hydrolase, at 402,284 to 403,453 _20790 IAI47_20795: IAI47_20795 - MFS transporter, at 403,825 to 405,165 _20795 IAI47_20800: IAI47_20800 - LysE family translocator, at 405,809 to 406,435 _20800 IAI47_20805: IAI47_20805 - ornithine cyclodeaminase family protein, at 406,467 to 407,438 _20805 IAI47_20810: IAI47_20810 - carboxymuconolactone decarboxylase family protein, at 407,454 to 407,999 _20810
Group Condition IAI47_20790 IAI47_20795 IAI47_20800 IAI47_20805 IAI47_20810
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.1 -0.8 -0.5 -0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.3 +0.1 +0.1 -0.7
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.4 -0.1 -0.4 -0.0
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.1 +0.0 +0.2 -0.6
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.0 -0.4 -0.0 -0.6
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 +0.1 -0.2 +0.2 -0.7
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.1 +0.1 -0.4 +0.2
no stress control Defined media control, aerobic -0.2 -0.4 -0.1 +0.2 +0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.1 +0.3 -0.2 -0.3
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.4 -0.0 -0.2 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.3 -0.2 -0.5 +0.0 +0.2
carbon source Ying_sugar7 rep C; time point 2 +0.3 -0.0 +0.1 -0.5 +0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.2 -0.0 -0.6 +0.3
no stress control Defined media control, aerobic -0.1 -0.1 +0.3 +0.3 -0.4
carbon source Ying_Nucleobase14 rep A; time point 1 +0.1 +0.2 -0.3 -0.2 +0.2
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.3 +0.2 -0.0 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.1 +0.3 +0.0 +0.3 -0.4
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.2 +0.3 +0.2 -0.1
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.0 -0.2 +0.2 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 +0.3 +0.0 -0.1 +0.3 -0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.0 -0.2 +0.2 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 +0.3 -0.2 +0.0 +0.4
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.2 +0.2 -0.1 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50 +0.3 +0.3 -0.1 +0.2 +0.2
stress copper (II) chloride 2 uM, anaerobic -0.1 -0.0 +0.2 +0.7 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.1 +0.1 -0.1 +0.3 +0.8
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.0 +0.3 +0.2 +0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.4 +0.2 +0.2 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.2 +0.5 +0.3 +0.4
stress copper (II) chloride 2 uM, anaerobic +0.3 +0.3 +0.6 +0.1 +0.2
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