Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_20230 and IAI47_20235 are separated by 24 nucleotidesIAI47_20235 and IAI47_20240 are separated by 71 nucleotidesIAI47_20240 and IAI47_20245 overlap by 14 nucleotidesIAI47_20245 and IAI47_20250 are separated by 51 nucleotides IAI47_20230: IAI47_20230 - peroxiredoxin, at 281,284 to 281,847 _20230 IAI47_20235: IAI47_20235 - thioredoxin family protein, at 281,872 to 283,113 _20235 IAI47_20240: IAI47_20240 - sigma-70 family RNA polymerase sigma factor, at 283,185 to 283,739 _20240 IAI47_20245: IAI47_20245 - DUF1109 domain-containing protein, at 283,726 to 284,367 _20245 IAI47_20250: IAI47_20250 - DeoR family transcriptional regulator, at 284,419 to 284,580 _20250
Group Condition IAI47_20230 IAI47_20235 IAI47_20240 IAI47_20245 IAI47_20250
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic +0.1 +0.2 -0.4 -0.6 -1.7
stress copper (II) chloride 2 uM, anaerobic -0.3 -0.1 -0.0 -0.8 -1.1
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 -0.3 -0.3 -0.3 -0.6
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 +0.0 -0.5 -0.3 -1.1
stress Uranyl Acetate Dihydrate 200 uM, anaerobic +0.1 -0.0 +0.1 -0.1 -1.8
no stress control Defined media control, anaerobic +0.2 +0.1 -0.2 -0.6 -1.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.1 +0.3 -0.6 -1.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.2 -0.3 -0.6 -1.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.8 -0.1 +0.3 -0.6 -0.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.1 -0.2 +0.3 -1.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.3 +0.2 +0.3 -0.1 -1.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.2 +0.1 +0.1 +0.5 -2.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 -0.1 +0.2 +0.2 +0.8 -2.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.0 -0.1 +0.8 -1.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 -0.1 -0.5 -0.1 +1.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.1 -0.6 -1.0 +1.8
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.0 -0.1 -0.7 +1.0
stress copper (II) chloride 2 uM, anaerobic -0.6 -0.2 +0.3 -0.3 +0.7
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.1 -0.6 -0.3 +1.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.2 +0.2 +0.9 -0.7
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.5 +0.1 -0.1 +0.9 +0.4
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.1 -0.1 -0.5 +1.6
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.2 +0.5 -0.5 +0.8
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.0 -0.3 -0.4 +2.0
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.2 +0.5 -0.7 +1.0
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 -0.0 +0.1 +1.0 +0.7
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 +0.4 -0.2 +1.3 -0.7
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.2 +0.2 -0.3 +1.0
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.2 -0.3 +0.3 +1.0
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.4 +0.3 +1.0 -0.3
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IAI47_20230
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IAI47_20235
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IAI47_20245
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IAI47_20250
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