Fitness for 5 genes in Pantoea sp. MT58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 309 experiments or choose conditions or try the comparative fitness browser

500 ntIAI47_20210 and IAI47_20215 are separated by 622 nucleotidesIAI47_20215 and IAI47_20220 overlap by 95 nucleotidesIAI47_20220 and IAI47_20225 are separated by 251 nucleotidesIAI47_20225 and IAI47_20230 are separated by 360 nucleotides IAI47_20210: IAI47_20210 - ABC transporter substrate-binding protein, at 276,033 to 276,803 _20210 IAI47_20215: IAI47_20215 - helix-turn-helix transcriptional regulator, at 277,426 to 278,463 _20215 IAI47_20220: IAI47_20220 - alpha/beta fold hydrolase, at 278,369 to 279,463 _20220 IAI47_20225: IAI47_20225 - aldose 1-epimerase family protein, at 279,715 to 280,923 _20225 IAI47_20230: IAI47_20230 - peroxiredoxin, at 281,284 to 281,847 _20230
Group Condition IAI47_20210 IAI47_20215 IAI47_20220 IAI47_20225 IAI47_20230
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.6 -0.2 -0.4 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.0 -0.3 -0.2 -0.4 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.8 -0.4 -0.2 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.4 -0.4 -0.1 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.5 -0.2 -0.2 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 +0.1 -0.5 -0.3 -0.1 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.2 -0.2 -0.3 -0.4
stress copper (II) chloride 2 uM, anaerobic -0.1 +0.0 -0.3 +0.1 -0.6
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.4 -0.3 -0.0 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50 -0.2 -0.3 -0.2 -0.2 +0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.1 -0.4 +0.2 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.4 -0.1 -0.4 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.4 -0.2 -0.1 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.6 -0.3 -0.1 +0.4
stress copper (II) chloride 2 uM, anaerobic +0.0 +0.2 -0.3 +0.2 -0.6
nitrogen source Ammonium chloride (N) +0.1 +0.2 -0.3 +0.0 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.1 -0.4 -0.1 -0.2 +0.4
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.1 +0.2 +0.3 -0.8
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 +0.0 +0.3 -0.3 -0.5
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.6 -0.2 -0.1 -0.0 -0.2
stress copper (II) chloride 2 uM, anaerobic +0.6 +0.3 -0.5 -0.1 -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.2 -0.1 -0.2 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 -0.3 -0.1 -0.1 +0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.2 +0.2 +0.2 +0.3
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.2 -0.0 +0.3 +0.1
no stress control Defined media control, aerobic +0.3 +0.1 +0.1 +0.3 +0.3
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.1 +0.1 +0.3 +0.6
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 +0.5 +0.1 -0.1 +0.3
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.1 +0.2 +0.4 +0.5
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic +0.3 +0.0 +0.2 +0.4 +0.5
remove
IAI47_20210
plot		 remove
IAI47_20215
plot		 remove
IAI47_20220		 remove
IAI47_20225
plot		 remove
IAI47_20230
plot