Fitness for 5 genes in Pantoea sp. MT58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 309 experiments or choose conditions or try the comparative fitness browser

500 ntIAI47_20190 and IAI47_20195 are separated by 98 nucleotidesIAI47_20195 and IAI47_20200 are separated by 99 nucleotidesIAI47_20200 and IAI47_20205 overlap by 16 nucleotidesIAI47_20205 and IAI47_20210 are separated by 36 nucleotides IAI47_20190: IAI47_20190 - urea carboxylase, at 269,444 to 273,049 _20190 IAI47_20195: IAI47_20195 - LysR family transcriptional regulator, at 273,148 to 274,053 _20195 IAI47_20200: IAI47_20200 - 2OG-Fe(II) oxygenase, at 274,153 to 274,926 _20200 IAI47_20205: IAI47_20205 - DUF2817 domain-containing protein, at 274,911 to 275,996 _20205 IAI47_20210: IAI47_20210 - ABC transporter substrate-binding protein, at 276,033 to 276,803 _20210
Group Condition IAI47_20190 IAI47_20195 IAI47_20200 IAI47_20205 IAI47_20210
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 -0.8 -0.3 -0.2 -0.3
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.8 -0.3 -0.2 -0.0
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.5 -0.1 -0.2 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.9 +0.2 -0.1 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 -0.2 -0.5 -0.4 +0.0 +0.1
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.6 -0.4 -0.1 +0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.3 -0.2 -0.2 -0.3
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 -0.6 -0.2 -0.0 +0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -0.3 -0.2 +0.3 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 -0.1 -0.3 -0.3 +0.3 -0.0
stress copper (II) chloride 2 uM, anaerobic +0.4 +0.2 -0.6 -0.3 -0.1
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.4 -0.1 -0.1 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50 +0.1 +0.1 -0.6 +0.1 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.2 -0.4 +0.2 +0.2
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.6 -0.1 +0.0 +0.3
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.5 +0.4 -0.1 +0.0
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.6 +0.4 +0.1 -0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.5 +0.1 -0.2 +0.2
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.3 -0.1 -0.2 +0.4
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.4 -0.5 -0.1 -0.1
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 -0.5 -0.0 +0.0 +0.2
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.4 +0.1 -0.1 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.1 -0.3 +0.3 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.2 +0.1 -0.3 +0.3 +0.2
no stress control Defined media control, aerobic +0.3 -0.0 -0.4 +0.2 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.3 -0.5 +0.3 +0.5
no stress control Defined media control, aerobic -0.1 +0.5 -0.0 -0.0 +0.4
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.1 +0.3 -0.1 +0.6
stress copper (II) chloride 2 uM, anaerobic +0.1 +0.5 -0.2 +0.0 +0.6
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic +0.0 +0.4 +0.0 +0.4 +0.3
remove
IAI47_20190
plot		 remove
IAI47_20195
plot		 remove
IAI47_20200		 remove
IAI47_20205
plot		 remove
IAI47_20210
plot