Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_20080 and IAI47_20085 are separated by 2 nucleotidesIAI47_20085 and IAI47_20090 are separated by 2 nucleotidesIAI47_20090 and IAI47_20095 overlap by 11 nucleotidesIAI47_20095 and IAI47_20100 are separated by 9 nucleotides IAI47_20080: IAI47_20080 - sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC, at 248,955 to 250,037 _20080 IAI47_20085: IAI47_20085 - carbohydrate kinase family protein, at 250,040 to 250,987 _20085 IAI47_20090: IAI47_20090 - carbohydrate ABC transporter permease, at 250,990 to 251,829 _20090 IAI47_20095: IAI47_20095 - sugar ABC transporter permease, at 251,819 to 252,727 _20095 IAI47_20100: IAI47_20100 - extracellular solute-binding protein, at 252,737 to 253,984 _20100
Group Condition IAI47_20080 IAI47_20085 IAI47_20090 IAI47_20095 IAI47_20100
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.6 -1.0 -0.1 -0.5 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.6 -0.5 -0.1 -0.4 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 -0.3 -0.1 -0.4 -0.7
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 -0.3 -0.5 -0.3 -0.2 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 -0.5 -0.4 -0.2 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 -0.4 -0.3 -0.3 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.4 -0.1 -0.4 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.0 -0.7 -0.4 -0.2 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.4 -0.1 +0.1 -0.7
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.2 -0.1 -0.3 -0.4
carbon source Ying_sugar7 rep C; time point 2 -0.1 -0.6 -0.4 -0.1 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.2 -0.2 -0.3 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.1 -0.8 +0.1 -0.2 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50 -0.1 -0.2 -0.3 -0.1 -0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.1 -0.7 +0.0 -0.3
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.5 -0.1 -0.3 +0.2
nitrogen source Ammonium chloride (N) -0.2 -0.2 -0.5 -0.3 -0.0
stress copper (II) chloride 2 uM, anaerobic +0.4 -0.8 -0.2 -0.5 -0.0
stress copper (II) chloride 2 uM, anaerobic -0.2 -0.4 +0.1 -0.2 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 -0.3 -0.1 +0.1 -0.4 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.1 -0.8 +0.1 -0.1 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.2 -0.6 +0.1 -0.4 -0.3
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.3 -0.2 +0.1 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 -0.2 -0.1 -0.4 +0.1 -0.3
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.5 +0.2 -0.2 -0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.3 -0.5 -0.1 -0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.3 -0.3 +0.2 -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.4 -0.1 +0.2 +0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.6 -0.2 +0.4 -0.0
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.5 +0.1 +0.1 +0.3
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IAI47_20080
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IAI47_20085
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IAI47_20095
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IAI47_20100
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