Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_20010 and IAI47_20015 are separated by 417 nucleotidesIAI47_20015 and IAI47_20020 are separated by 19 nucleotidesIAI47_20020 and IAI47_20025 are separated by 80 nucleotidesIAI47_20025 and IAI47_20030 are separated by 10 nucleotides IAI47_20010: IAI47_20010 - GntR family transcriptional regulator, at 234,187 to 234,921 _20010 IAI47_20015: IAI47_20015 - MsnO8 family LLM class oxidoreductase, at 235,339 to 236,337 _20015 IAI47_20020: IAI47_20020 - amidohydrolase, at 236,357 to 237,508 _20020 IAI47_20025: IAI47_20025 - LLM class flavin-dependent oxidoreductase, at 237,589 to 238,902 _20025 IAI47_20030: IAI47_20030 - ABC transporter substrate-binding protein, at 238,913 to 239,854 _20030
Group Condition IAI47_20010 IAI47_20015 IAI47_20020 IAI47_20025 IAI47_20030
nitrogen source Ammonium chloride (N) -0.3 +0.0 -0.2 -0.3 -0.7
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.6 +0.1 -0.5 -0.5 +0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 -0.0 -0.2 -0.1 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.6 +0.1 -0.1 -0.4 -0.1
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 -0.4 +0.1 -1.0 +0.0
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.4 -0.5 +0.1 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 +0.2 -0.2 -0.6 -0.0
stress copper (II) chloride 2 uM, anaerobic -0.2 -1.0 -0.1 +0.4 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.1 -0.6 -0.2 +0.4
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.3 -0.4 -0.2 +0.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.3 -0.5 +0.3 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.6 +0.5 +0.1 -0.6 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.5 +0.4 -0.1 -0.3 -0.2
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.4 -0.5 +0.1 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 -0.3 +0.2 -0.5 -0.1 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 +0.5 -0.0 -0.7 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 -0.4 +0.4 -0.5 -0.2 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 -0.2 +0.3 -0.5 -0.0 +0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.1 -0.5 +0.2 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 -0.7 +0.5 -0.1 +0.2 +0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 -0.0 -0.2 -0.5 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 +0.2 -0.1 +0.2 +0.4
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.4 -0.3 +0.4 -0.0
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.2 +0.3 -0.4 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 +0.3 +0.5 -0.1 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 +0.3 +0.2 -0.2 +0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50 -0.5 +0.3 +0.3 -0.3 +0.6
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.3 +0.4 +0.1 +0.4
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.3 -0.0 +0.4 +0.4
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.3 +0.2 -0.0 +0.6
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IAI47_20010
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IAI47_20015
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IAI47_20025
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IAI47_20030
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