Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_19560 and IAI47_19565 are separated by 1129 nucleotidesIAI47_19565 and IAI47_19570 are separated by 17 nucleotidesIAI47_19570 and IAI47_19575 are separated by 93 nucleotidesIAI47_19575 and IAI47_19580 are separated by 163 nucleotides IAI47_19560: IAI47_19560 - type 1 glutamine amidotransferase domain-containing protein, at 140,434 to 141,114 _19560 IAI47_19565: IAI47_19565 - phenolic acid decarboxylase, at 142,244 to 142,768 _19565 IAI47_19570: IAI47_19570 - H(+)/Cl(-) exchange transporter ClcA, at 142,786 to 144,177 _19570 IAI47_19575: IAI47_19575 - hypothetical protein, at 144,271 to 144,579 _19575 IAI47_19580: IAI47_19580 - FAD-dependent oxidoreductase, at 144,743 to 145,969 _19580
Group Condition IAI47_19560 IAI47_19565 IAI47_19570 IAI47_19575 IAI47_19580
nitrogen source Ammonium chloride (N) -0.6 -0.5 +0.1 -0.3 +0.1
stress copper (II) chloride 2 uM, anaerobic -0.0 -0.1 -0.1 -0.9 -0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.3 -0.2 -0.4 -0.3
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.1 -0.1 -0.9 +0.1
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 +0.2 -0.2 -1.0 +0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.5 +0.2 -0.3 -0.0
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.2 -0.6 +0.1 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.3 -0.4 +0.4 -0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.1 +0.2 -0.8 +0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 -0.1 -0.5 +0.3 -0.0
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 +0.1 +0.3 +0.4 -0.2
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.2 +0.3 +0.4 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50 +0.1 -0.3 -0.1 +0.7 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 -0.1 -0.2 -0.0 +0.7 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.2 -0.2 +0.2 +0.6 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.2 +0.1 +0.8 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.2 -0.0 +0.7 +0.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.2 +0.4 +0.6 +0.1
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.5 +0.4 -0.3 +0.1
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 +0.2 +0.0 +0.7 +0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.1 +0.1 +0.7 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.0 +0.1 +0.9 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.3 -0.1 +1.2 +0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.3 +0.0 +0.7 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 -0.1 +0.3 +0.6 +0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.3 +0.3 +0.3 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 -0.0 +0.0 +1.0 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.2 +0.2 +0.1 +0.7 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 -0.1 +0.0 +1.1 +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.2 -0.1 +1.0 +0.2
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IAI47_19560
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IAI47_19565
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IAI47_19575
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IAI47_19580
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