Fitness for 5 genes in Pantoea sp. MT58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 309 experiments or choose conditions or try the comparative fitness browser

500 ntIAI47_19530 and IAI47_19535 overlap by 35 nucleotidesIAI47_19535 and IAI47_19540 are separated by 380 nucleotidesIAI47_19540 and IAI47_19545 are separated by 163 nucleotidesIAI47_19545 and IAI47_19550 are separated by 63 nucleotides IAI47_19530: IAI47_19530 - hypothetical protein, at 136,066 to 136,263 _19530 IAI47_19535: IAI47_19535 - DUF4113 domain-containing protein, at 136,229 to 136,480 _19535 IAI47_19540: IAI47_19540 - nitroreductase family protein, at 136,861 to 137,601 _19540 IAI47_19545: IAI47_19545 - MFS transporter, at 137,765 to 138,967 _19545 IAI47_19550: IAI47_19550 - DUF1471 domain-containing protein, at 139,031 to 139,246 _19550
Group Condition IAI47_19530 IAI47_19535 IAI47_19540 IAI47_19545 IAI47_19550
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.0 -0.2 +0.1 -3.1
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.2 -0.2 -0.1 -3.3
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.3 -0.5 +0.0 -2.7
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 -0.5 -0.2 -0.3 -1.5
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.3 +0.2 -0.2 -2.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 +0.6 -0.7 -0.5 -1.6
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.1 -0.5 -0.4 -1.6
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.2 +0.1 +0.3 -2.7
nitrogen source nitrogen source nitrite 1mM -0.4 -0.4 +0.0 -0.2 -1.0
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.1 -0.1 -0.1 -1.8
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.1 +0.0 -0.0 -2.1
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 +0.1 -0.1 +0.0 -1.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.0 +0.2 -0.0 -1.6
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.2 +0.2 -0.0 -1.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 +0.2 +0.1 +0.3 +0.1 -1.9
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.2 -0.0 +0.3 -1.4
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.6 -0.5 +0.0 -0.1 -0.9
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.6 -0.8 -0.5 +0.1 +0.7
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.1 +0.3 +0.1 +0.2 -1.5
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 -0.3 +0.4 +0.0 -1.1
nitrogen source Ammonium chloride (N) -0.4 -0.2 -0.6 +0.6 +0.9
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.6 +0.1 +0.0 +1.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.7 -0.2 +0.4 +1.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.0 +0.5 -0.3 +1.2
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.2 +0.2 -0.2 +1.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.5 -0.1 +0.3 +0.1 +1.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.1 +0.1 -0.0 +1.6
stress copper (II) chloride 2 uM, anaerobic +1.5 -0.2 +0.2 +0.1 +0.3
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 +0.5 -0.0 -0.4 +1.5
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.2 +0.4 +0.3 +1.6
remove
IAI47_19530
plot		 remove
IAI47_19535
plot		 remove
IAI47_19540		 remove
IAI47_19545
plot		 remove
IAI47_19550
plot