Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_19255 and IAI47_19260 are separated by 34 nucleotidesIAI47_19260 and IAI47_19265 overlap by 4 nucleotidesIAI47_19265 and IAI47_19270 are separated by 709 nucleotidesIAI47_19270 and IAI47_19275 are separated by 116 nucleotides IAI47_19255: IAI47_19255 - substrate-binding domain-containing protein, at 77,352 to 78,332 _19255 IAI47_19260: IAI47_19260 - ABC transporter permease, at 78,367 to 79,392 _19260 IAI47_19265: IAI47_19265 - xylulokinase, at 79,389 to 80,837 _19265 IAI47_19270: IAI47_19270 - alpha/beta fold hydrolase, at 81,547 to 82,311 _19270 IAI47_19275: IAI47_19275 - DMT family transporter, at 82,428 to 82,962 _19275
Group Condition IAI47_19255 IAI47_19260 IAI47_19265 IAI47_19270 IAI47_19275
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 -0.5 -0.2 -0.6 -0.7
carbon source Ying_sugar7 rep C; time point 2 +0.3 -0.0 -0.1 -0.1 -1.3
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.1 +0.3 -1.0 -0.8
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 +0.1 +0.1 -0.5 -0.5
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 +0.4 +0.1 -0.2 -1.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.5 -0.2 -0.8 +0.5
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.5 +0.0 +0.0 -0.8
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.1 +0.5 -0.2 -0.7
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 +0.3 -0.5 +0.3 -0.9
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.2 -0.0 +0.3 -0.7 +0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.1 -0.0 -0.7 +0.8
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.2 +0.4 -0.3 +0.5
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.2 +0.1 -0.2 +0.8
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 +0.4 +0.1 -0.6 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.1 +0.3 -0.4 +0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.3 +0.3 -0.5 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.1 +0.3 -0.4 +0.5
nitrogen source Ammonium chloride (N) -0.0 -0.3 -0.2 +0.4 +0.7
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.5 -0.0 -0.4 +0.6
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 -0.2 +0.4 -0.2 +0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.2 +0.3 +0.3 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 -0.1 +0.4 -0.2 +0.6
stress copper (II) chloride 2 uM, anaerobic +0.3 -0.1 -0.3 +0.6 +0.7
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.6 +0.5 +0.1 -0.3 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.4 +0.2 -0.2 +0.6
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 +0.4 +0.3 -0.2 +0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.2 +0.4 +0.1 +0.7
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 +0.4 +0.4 -0.0 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.8 +0.4 +0.2 -0.1 +0.7
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 +0.2 +0.6 -0.0 +0.7
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IAI47_19255
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IAI47_19260
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IAI47_19270
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IAI47_19275
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